RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 PCDHB7Q9Y5E2 793 aa17.33■□□□□ 0.36
TRAF3-204ENST00000539721 PCDHB4Q9Y5E5 795 aa17.33■□□□□ 0.36
TRAF3-204ENST00000539721 SSU72P8A0A1W2PR75 194 aa17.32■□□□□ 0.36
TRAF3-204ENST00000539721 PIRO00625 290 aa17.32■□□□□ 0.36
TRAF3-204ENST00000539721 ASPAP45381 313 aa17.32■□□□□ 0.36
TRAF3-204ENST00000539721 KCNJ6P48051 423 aa17.32■□□□□ 0.36
TRAF3-204ENST00000539721 TNNC1P63316 161 aa17.32■□□□□ 0.36
TRAF3-204ENST00000539721 MAPK8IP2Q13387 824 aaPredicted RBP17.32■□□□□ 0.36
TRAF3-204ENST00000539721 IKBKEQ14164 716 aa17.32■□□□□ 0.36
TRAF3-204ENST00000539721 NAB2Q15742 525 aa17.32■□□□□ 0.36
TRAF3-204ENST00000539721 MFSD5Q6N075 450 aa17.32■□□□□ 0.36
TRAF3-204ENST00000539721 CCDC170Q8IYT3 715 aa17.32■□□□□ 0.36
TRAF3-204ENST00000539721 TMEM199Q8N511 208 aa17.32■□□□□ 0.36
TRAF3-204ENST00000539721 KIAA1524Q8TCG1 905 aa17.32■□□□□ 0.36
TRAF3-204ENST00000539721 FAXDC2Q96IV6 333 aa17.32■□□□□ 0.36
TRAF3-204ENST00000539721 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.31■□□□□ 0.36
TRAF3-204ENST00000539721 INPPL1O15357 1258 aa17.31■□□□□ 0.36
TRAF3-204ENST00000539721 FGFR1P11362 822 aa17.31■□□□□ 0.36
TRAF3-204ENST00000539721 CSF2RAP15509 400 aa17.31■□□□□ 0.36
TRAF3-204ENST00000539721 ACO1P21399 889 aaKnown RBP17.31■□□□□ 0.36
TRAF3-204ENST00000539721 PNPLA4P41247 253 aa17.31■□□□□ 0.36
TRAF3-204ENST00000539721 YWHAEP62258 255 aaKnown RBP17.31■□□□□ 0.36
TRAF3-204ENST00000539721 CLLU1OSQ5K130 101 aa17.31■□□□□ 0.36
TRAF3-204ENST00000539721 TOGARAM2Q6ZUX3 1019 aa17.31■□□□□ 0.36
TRAF3-204ENST00000539721 URGCPQ8TCY9 931 aa17.31■□□□□ 0.36
TRAF3-204ENST00000539721 BCO2Q9BYV7 579 aa17.31■□□□□ 0.36
TRAF3-204ENST00000539721 PRKAG2Q9UGJ0 569 aa17.31■□□□□ 0.36
TRAF3-204ENST00000539721 EPN1Q9Y6I3 576 aaPredicted RBP17.31■□□□□ 0.36
TRAF3-204ENST00000539721 CYP26A1O43174 497 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 AKR1B10O60218 316 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 NDUFA10O95299 355 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 WEE2P0C1S8 567 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 CD58P19256 250 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 CLCN1P35523 988 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 TAF6P49848 677 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 PTK2Q05397 1052 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 UBR7Q8N806 425 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 DESI2Q9BSY9 194 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 SMYD3Q9H7B4 428 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 CISHQ9NSE2 258 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
TRAF3-204ENST00000539721 TTC3P53804 2025 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 LTBP2Q14767 1821 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 CASTOR2A6NHX0 329 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 ESPNB1AK53 854 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 RAP1GAPP47736 663 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 KIF11P52732 1056 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 SV2CQ496J9 727 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 NOMO2Q5JPE7 1267 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 TMEM270Q6UE05 265 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 ZNF571Q7Z3V5 609 aaPredicted RBP17.3■□□□□ 0.36
TRAF3-204ENST00000539721 ABI1Q8IZP0 508 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 VWCEQ96DN2 955 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 MMS19Q96T76 1030 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.3■□□□□ 0.36
TRAF3-204ENST00000539721 CYP3A43Q9HB55 503 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 CACNG4Q9UBN1 327 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 SNX9Q9Y5X1 595 aa17.3■□□□□ 0.36
TRAF3-204ENST00000539721 PODXLO00592 558 aa17.29■□□□□ 0.36
TRAF3-204ENST00000539721 RPL9P32969 192 aaKnown RBP17.29■□□□□ 0.36
TRAF3-204ENST00000539721 PDE6CP51160 858 aa17.29■□□□□ 0.36
TRAF3-204ENST00000539721 CLCNKBP51801 687 aa17.29■□□□□ 0.36
TRAF3-204ENST00000539721 TUSC3Q13454 348 aa17.29■□□□□ 0.36
TRAF3-204ENST00000539721 VPS36Q86VN1 386 aa17.29■□□□□ 0.36
TRAF3-204ENST00000539721 NPAS4Q8IUM7 802 aa17.29■□□□□ 0.36
TRAF3-204ENST00000539721 RPUSD2Q8IZ73 545 aaKnown RBP17.29■□□□□ 0.36
TRAF3-204ENST00000539721 C17orf53Q8N3J3 647 aaPredicted RBP17.29■□□□□ 0.36
TRAF3-204ENST00000539721 RBBP8NLQ8NC74 664 aaPredicted RBP17.29■□□□□ 0.36
TRAF3-204ENST00000539721 SDCBP2Q9H190 292 aa17.29■□□□□ 0.36
TRAF3-204ENST00000539721 SPTLC3Q9NUV7 552 aa17.29■□□□□ 0.36
TRAF3-204ENST00000539721 KANSL3Q9P2N6 904 aa17.29■□□□□ 0.36
TRAF3-204ENST00000539721 KPNA7A9QM74 516 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 EIF3CLB5ME19 914 aaKnown RBP17.28■□□□□ 0.36
TRAF3-204ENST00000539721 HOXA2O43364 376 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 IPO7O95373 1038 aaKnown RBP17.28■□□□□ 0.36
TRAF3-204ENST00000539721 CDH8P55286 799 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 ASTE1Q2TB18 679 aaPredicted RBP17.28■□□□□ 0.36
TRAF3-204ENST00000539721 SLC47A2Q86VL8 602 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 C7orf61Q8IZ16 206 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 ACRBPQ8NEB7 543 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 EIF3CQ99613 913 aaKnown RBP17.28■□□□□ 0.36
TRAF3-204ENST00000539721 CNTN6Q9UQ52 1028 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 SPTLC1O15269 473 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 PFKMP08237 780 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 CCDC175P0C221 793 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 CYP11B1P15538 503 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 ANXA13P27216 316 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 BPIFB4P59827 614 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 RNASELQ05823 741 aaKnown RBP17.28■□□□□ 0.36
TRAF3-204ENST00000539721 SMYD5Q6GMV2 418 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.28■□□□□ 0.36
TRAF3-204ENST00000539721 EPS8L1Q8TE68 723 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 DDX27Q96GQ7 796 aaKnown RBP17.28■□□□□ 0.36
TRAF3-204ENST00000539721 UROC1Q96N76 676 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 AGPAT1Q99943 283 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 ACP6Q9NPH0 428 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 TBC1D13Q9NVG8 400 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 PPP2R2CQ9Y2T4 447 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 ADGRG1Q9Y653 693 aa17.28■□□□□ 0.36
TRAF3-204ENST00000539721 ABHD14A-ACY1A0A1B0GW23 586 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms