RNA–Protein interactions for RNA: ENST00000539573.5

NDUFA9-205, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 3

Gene NDUFA9, Length 500 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-205ENST00000539573 PATJQ8NI35 1801 aa9.75□□□□□ -0.85
NDUFA9-205ENST00000539573 MTCL1Q9Y4B5 1905 aaKnown RBP9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 MAP1BP46821 2468 aaKnown RBP9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 SHISA7A6NL88 538 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 C4orf47A7E2U8 309 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 NEMFO60524 1076 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 SEC24AO95486 1093 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 HSPA4P34932 840 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 KRT2P35908 639 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 CCR2P41597 374 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 SOX9P48436 509 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 EPHA5P54756 1037 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 EVCP57679 992 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 STK3Q13188 491 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 GAS6Q14393 721 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 NAB2Q15742 525 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 ZNF568Q3ZCX4 644 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 FBXO43Q4G163 708 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 USP39Q53GS9 565 aaKnown RBP9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 GPR158Q5T848 1215 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 SH3PXD2AQ5TCZ1 1133 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 PADI6Q6TGC4 694 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 RUFY3Q7L099 469 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 ZCCHC14Q8WYQ9 949 aaKnown RBP9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 KIFAP3Q92845 792 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 ACDQ96AP0 544 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 ZC3H10Q96K80 434 aaKnown RBP9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 DRC1Q96MC2 740 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 AGXT2Q9BYV1 514 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 GOLGA2P5Q9HBQ8 144 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 TMEM9BQ9NQ34 198 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 GTSE1Q9NYZ3 720 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 KCNG1Q9UIX4 513 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 SNX14Q9Y5W7 946 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 VPS13AQ96RL7 3174 aa9.74□□□□□ -0.85
NDUFA9-205ENST00000539573 OR6C75A6NL08 312 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 CCDC169A6NNP5 214 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 XPOTO43592 962 aaKnown RBP9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 EXTL3O43909 919 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 APBB3O95704 486 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 CYP11B2P19099 503 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 CSRP1P21291 193 aaKnown RBP9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 CDC25CP30307 473 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 AVPR1AP37288 418 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 GRM5P41594 1212 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 PXNP49023 591 aaPredicted RBP9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 MCM2P49736 904 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 OSTNP61366 133 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 LMAN2Q12907 356 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 BFSP1Q12934 665 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 UAP1L1Q3KQV9 507 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 PLA2G2CQ5R387 149 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 LRSAM1Q6UWE0 723 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 DSTYKQ6XUX3 929 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 SHKBP1Q8TBC3 707 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 DDX12PQ92771 950 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 SUSD3Q96L08 255 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 MRPL4Q9BYD3 311 aaKnown RBP9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 CEP72Q9P209 647 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 PCDHB8Q9UN66 801 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 TNFSF13BQ9Y275 285 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 YIPF1Q9Y548 306 aa9.73□□□□□ -0.85
NDUFA9-205ENST00000539573 CHD8Q9HCK8 2581 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 TDRD15B5MCY1 1934 aaKnown RBP9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 ARNTLO00327 626 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 SEC24BO95487 1268 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 DRD1P21728 446 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 GABRR2P28476 465 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 DPP6P42658 865 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 MATR3P43243 847 aaKnown RBP eCLIP9.72□□□□□ -0.851e-8■■□□□ 12.6
NDUFA9-205ENST00000539573 TUFMP49411 452 aaKnown RBP9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 ATXN3P54252 364 aaPredicted RBP9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 STRN3Q13033 797 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 NR1H3Q13133 447 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 PSMD2Q13200 908 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 CCINQ13939 588 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 PLK5Q496M5 336 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 EEF1DP3Q658K8 133 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 HAUS3Q68CZ6 603 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 LMBRD2Q68DH5 695 aaPredicted RBP9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 RNF19BQ6ZMZ0 732 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 CYP2U1Q7Z449 544 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 YTHDC1Q96MU7 727 aaKnown RBP9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 TBC1D32Q96NH3 1257 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 AIFM3Q96NN9 605 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 PGLYRP2Q96PD5 576 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 SMOC1Q9H4F8 434 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 TASP1Q9H6P5 420 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 RXFP3Q9NSD7 469 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 RBM19Q9Y4C8 960 aaKnown RBP9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 STK24Q9Y6E0 443 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 DMXL1Q9Y485 3027 aa9.72□□□□□ -0.85
NDUFA9-205ENST00000539573 COL4A3Q01955 1670 aa9.71□□□□□ -0.85
NDUFA9-205ENST00000539573 ATRXP46100 2492 aa9.71□□□□□ -0.85
NDUFA9-205ENST00000539573 BCLAF3A2AJT9 711 aaKnown RBP9.71□□□□□ -0.86
NDUFA9-205ENST00000539573 SRRM3A6NNA2 597 aaPredicted RBP9.71□□□□□ -0.86
NDUFA9-205ENST00000539573 MAP3K13O43283 966 aa9.71□□□□□ -0.86
NDUFA9-205ENST00000539573 MCF2P10911 925 aa9.71□□□□□ -0.86
NDUFA9-205ENST00000539573 HARSP12081 509 aaKnown RBP9.71□□□□□ -0.86
NDUFA9-205ENST00000539573 KCNE1P15382 129 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms