RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SURF1Q15526 300 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 GPATCH11Q8N954 259 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 BCAS4Q8TDM0 211 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 EPS8L1Q8TE68 723 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 NOX5Q96PH1 765 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 RUFY1Q96T51 708 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 RBM12Q9NTZ6 932 aaKnown RBP18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 MYH10P35580 1976 aa18.27■□□□□ 0.51
PCDHB17P-201ENST00000539533 B4GALT4O60513 344 aa18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 CALCAP01258 141 aa18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 MYCNP04198 464 aaPredicted RBP18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 KRT5P13647 590 aa18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 HOXA11P31270 313 aaPredicted RBP18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 NOP14P78316 857 aaKnown RBP18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 TTMPQ5BVD1 217 aa18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 RPUSD2Q8IZ73 545 aaKnown RBP18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 TMEM130Q8N3G9 435 aa18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 ARL8AQ96BM9 186 aa18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 NOCTQ9UK39 431 aaKnown RBP18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 ANK1P16157 1881 aa18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 LACTBL1A8MY62 500 aa18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 CLTAP09496 248 aa18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 H2AFZP0C0S5 128 aa18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 CHRNB2P17787 502 aa18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 CDC42EP1Q00587 391 aa18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 GLE1Q53GS7 698 aaKnown RBP18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 H2AFVQ71UI9 128 aa18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 ENOSF1Q7L5Y1 443 aa18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 CATSPER4Q7RTX7 472 aa18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 RNF10Q8N5U6 811 aaKnown RBP18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 TMEM40Q8WWA1 233 aa18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 MTG1Q9BT17 334 aaPredicted RBP18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 UPF3AQ9H1J1 476 aaKnown RBP18.26■□□□□ 0.51
PCDHB17P-201ENST00000539533 TMEM191BP0C7N4 346 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 DARSP14868 501 aaKnown RBP18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 CYP11B1P15538 503 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 HOXC8P31273 242 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 VEGFBP49765 207 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 GALCP54803 685 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 MYL6P60660 151 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 NNTQ13423 1086 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 CUL2Q13617 745 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 NBPF20Q3BBV1 942 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 SLC10A6Q3KNW5 377 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 ZNF784Q8NCA9 323 aaPredicted RBP18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 PCDHB18PQ96TA0 734 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 SPC25Q9HBM1 224 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 XPNPEP3Q9NQH7 507 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 SRRDQ9UH36 339 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 TSKSQ9UJT2 592 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 KPNA6O60684 536 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 ADAMTS4O75173 837 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 NFICP08651 508 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 EIF4BP23588 611 aaKnown RBP18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 SKOR1P84550 965 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 CFAP221Q4G0U5 840 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 MS4A14Q96JA4 679 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 CFHR5Q9BXR6 569 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 RABEP2Q9H5N1 569 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 FAM169AQ9Y6X4 670 aa18.25■□□□□ 0.51
PCDHB17P-201ENST00000539533 IL18RAPO95256 599 aa18.24■□□□□ 0.51
PCDHB17P-201ENST00000539533 ASS1P00966 412 aaKnown RBP18.24■□□□□ 0.51
PCDHB17P-201ENST00000539533 MMEP08473 750 aa18.24■□□□□ 0.51
PCDHB17P-201ENST00000539533 GNAT1P11488 350 aa18.24■□□□□ 0.51
PCDHB17P-201ENST00000539533 TTC19Q6DKK2 380 aaPredicted RBP18.24■□□□□ 0.51
PCDHB17P-201ENST00000539533 JADE1Q6IE81 842 aa18.24■□□□□ 0.51
PCDHB17P-201ENST00000539533 ADPGKQ9BRR6 497 aa18.24■□□□□ 0.51
PCDHB17P-201ENST00000539533 CASP8AP2Q9UKL3 1982 aa18.24■□□□□ 0.51
PCDHB17P-201ENST00000539533 CEP350Q5VT06 3117 aa18.24■□□□□ 0.51
PCDHB17P-201ENST00000539533 ACO1P21399 889 aaKnown RBP18.24■□□□□ 0.51
PCDHB17P-201ENST00000539533 LIG3P49916 1009 aa18.24■□□□□ 0.51
PCDHB17P-201ENST00000539533 SNX17Q15036 470 aa18.24■□□□□ 0.51
PCDHB17P-201ENST00000539533 IFT20Q8IY31 132 aa18.24■□□□□ 0.51
PCDHB17P-201ENST00000539533 ANKRD36BP1Q96IX9 119 aa18.24■□□□□ 0.51
PCDHB17P-201ENST00000539533 FAM81BQ96LP2 452 aa18.24■□□□□ 0.51
PCDHB17P-201ENST00000539533 ZIM3Q96PE6 472 aa18.24■□□□□ 0.51
PCDHB17P-201ENST00000539533 RNF14Q9UBS8 474 aa18.24■□□□□ 0.51
PCDHB17P-201ENST00000539533 NPTXRO95502 500 aa18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 TNNC2P02585 160 aa18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 ABCB4P21439 1286 aa18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 FMO1Q01740 532 aa18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 TRPC3Q13507 836 aa18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 DDX1Q92499 740 aaKnown RBP18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 EIF2AQ9BY44 585 aaKnown RBP18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 IMPG2Q9BZV3 1241 aa18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 BTNL10A8MVZ5 291 aa18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 PALMO75781 387 aa18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 ASGR1P07306 291 aa18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 GLI1P08151 1106 aa18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 PDE6CP51160 858 aa18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 KCNA10Q16322 511 aa18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 SWT1Q5T5J6 900 aaKnown RBP18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 GDF6Q6KF10 455 aaPredicted RBP18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 CCDC91Q7Z6B0 441 aa18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 ACAP3Q96P50 834 aa18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 GDF3Q9NR23 364 aa18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 GTF2IRD1Q9UHL9 959 aa18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 INTUQ9ULD6 942 aa18.23■□□□□ 0.51
PCDHB17P-201ENST00000539533 SCN10AQ9Y5Y9 1956 aa18.22■□□□□ 0.51
PCDHB17P-201ENST00000539533 A6NNZ2 444 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms