RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 SF3B1O75533 1304 aaKnown RBP eCLIP10.99□□□□□ -0.656e-6■■■■■ 122.4
CLPB-210ENST00000539148 GBF1Q92538 1859 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 SCN1AP35498 2009 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 ANO9A1A5B4 782 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 KPNA7A9QM74 516 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 PIRO00625 290 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 ARHGAP6O43182 974 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 ASS1P00966 412 aaKnown RBP10.98□□□□□ -0.65
CLPB-210ENST00000539148 ODC1P11926 461 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 EPHB4P54760 987 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 GCNT1Q02742 428 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 SHHQ15465 462 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 UPP1Q16831 310 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 TCTN1Q2MV58 587 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 CBWD6Q4V339 395 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 PAN2Q504Q3 1202 aaKnown RBP10.98□□□□□ -0.65
CLPB-210ENST00000539148 EPC2Q52LR7 807 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 FIGNQ5HY92 759 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 CBWD3Q5JTY5 395 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 CBWD5Q5RIA9 395 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 TRIM65Q6PJ69 517 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 DSTYKQ6XUX3 929 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 CNGA4Q8IV77 575 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 COLGALT2Q8IYK4 626 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 TMEM86AQ8N2M4 240 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 GSTCDQ8NEC7 633 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 ZNF516Q92618 1163 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 VWCEQ96DN2 955 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 ZMAT2Q96NC0 199 aaKnown RBP10.98□□□□□ -0.65
CLPB-210ENST00000539148 INTS2Q9H0H0 1204 aaKnown RBP10.98□□□□□ -0.65
CLPB-210ENST00000539148 KCNF1Q9H3M0 494 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 CYP3A43Q9HB55 503 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 SPG21Q9NZD8 308 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 APEX2Q9UBZ4 518 aa10.98□□□□□ -0.65
CLPB-210ENST00000539148 LAMA3Q16787 3333 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 CASTOR2A6NHX0 329 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 MEIS3P2A8K0S8 358 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 RB1P06400 928 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 FXR1P51114 621 aaKnown RBP eCLIP10.97□□□□□ -0.65
CLPB-210ENST00000539148 CLCNKBP51801 687 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 BCAR1P56945 870 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 BPIFB4P59827 614 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 NOP14P78316 857 aaKnown RBP10.97□□□□□ -0.65
CLPB-210ENST00000539148 CREMQ03060 361 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 SYCP1Q15431 976 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 WDR72Q3MJ13 1102 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 C1orf220Q5T0J3 134 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 LMBRD2Q68DH5 695 aaPredicted RBP10.97□□□□□ -0.65
CLPB-210ENST00000539148 KCNT2Q6UVM3 1135 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 MTERF4Q7Z6M4 381 aaKnown RBP10.97□□□□□ -0.65
CLPB-210ENST00000539148 THEM5Q8N1Q8 247 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 PPM1KQ8N3J5 372 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 TOP6BLQ8N6T0 577 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 PLEKHO2Q8TD55 490 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 SP7Q8TDD2 431 aaPredicted RBP10.97□□□□□ -0.65
CLPB-210ENST00000539148 TAS1R2Q8TE23 839 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 C18orf25Q96B23 403 aaPredicted RBP10.97□□□□□ -0.65
CLPB-210ENST00000539148 NAP1L5Q96NT1 182 aaPredicted RBP10.97□□□□□ -0.65
CLPB-210ENST00000539148 SPAG5Q96R06 1193 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 PANX2Q96RD6 677 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 MMS19Q96T76 1030 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 NIF3L1Q9GZT8 377 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 NRDE2Q9H7Z3 1164 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 SLC28A3Q9HAS3 691 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 RNF19AQ9NV58 838 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 GDAP2Q9NXN4 497 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 CXXC1Q9P0U4 656 aaPredicted RBP10.97□□□□□ -0.65
CLPB-210ENST00000539148 TUBGCP4Q9UGJ1 667 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 ADAM28Q9UKQ2 775 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 MYO6Q9UM54 1294 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 KIAA1671Q9BY89 1806 aa10.97□□□□□ -0.65
CLPB-210ENST00000539148 CUL9Q8IWT3 2517 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 PTPRJQ12913 1337 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 H7C4K7 107 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 NRP1O14786 923 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 SYN3O14994 580 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 LPXNO60711 386 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 GALTP07902 379 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 PON1P27169 355 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 LHX1P48742 406 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 LILRA4P59901 499 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 MYL6P60660 151 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 SMAD3P84022 425 aaKnown RBP10.96□□□□□ -0.65
CLPB-210ENST00000539148 UBE3AQ05086 875 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 TBX2Q13207 712 aaPredicted RBP10.96□□□□□ -0.65
CLPB-210ENST00000539148 NAB2Q15742 525 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 KIAA1841Q6NSI8 718 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 APTXQ7Z2E3 356 aaKnown RBP10.96□□□□□ -0.65
CLPB-210ENST00000539148 ZNF280BQ86YH2 543 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 GPR65Q8IYL9 337 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 CLP1Q92989 425 aaKnown RBP10.96□□□□□ -0.65
CLPB-210ENST00000539148 CRACR2AQ9BSW2 395 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 C11orf84Q9BUA3 381 aaPredicted RBP10.96□□□□□ -0.65
CLPB-210ENST00000539148 SNX25Q9H3E2 840 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 ZNHIT6Q9NWK9 470 aaKnown RBP10.96□□□□□ -0.65
CLPB-210ENST00000539148 MIOSQ9NXC5 875 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 CEP72Q9P209 647 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 SNX9Q9Y5X1 595 aa10.96□□□□□ -0.65
CLPB-210ENST00000539148 A0A1W2PQJ5 194 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 DYNC1I1O14576 645 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms