RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	CBWD1	Q9BRT8	395 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	FAM213A	Q9BRX8	229 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	FGFBP2	Q9BYJ0	223 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	DPP3	Q9NY33	737 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	RBAK	Q9NYW8	714 aa	Predicted RBP	13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	IGSF9	Q9P2J2	1179 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	EPS15L1	Q9UBC2	864 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	AFF4	Q9UHB7	1163 aa	Known RBP	13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	SERTAD1	Q9UHV2	236 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	FBXL5	Q9UKA1	691 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	TECTA	O75443	2155 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	CLUH	O75153	1309 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	SCN1A	P35498	2009 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828		A0A1B0GVL5	298 aa		13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	PRPF40A	O75400	957 aa	Known RBP	13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	RFPL2	O75678	378 aa		13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	ODC1	P11926	461 aa		13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	TAF6	P49848	677 aa		13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	ROR1	Q01973	937 aa		13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	CUL4B	Q13620	913 aa		13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	PTPN21	Q16825	1174 aa		13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	KNOP1	Q1ED39	458 aa	Known RBP	13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	CTXN3	Q4LDR2	81 aa		13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	PPM1L	Q5SGD2	360 aa		13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	USP37	Q86T82	979 aa		13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	SLC9A9	Q8IVB4	645 aa		13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	EFCAB13	Q8IY85	973 aa		13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	CCDC47	Q96A33	483 aa	Known RBP	13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	FAM212A	Q96EL1	285 aa		13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	APOL5	Q9BWW9	433 aa		13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	AGPAT3	Q9NRZ7	376 aa		13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	EXOC1	Q9NV70	894 aa		13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	ITGA11	Q9UKX5	1188 aa		13.31	□□□□□ -0.28
CLTCL1-205	ENST00000538828	C2CD4D	B7Z1M9	353 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828		I3L4J1	428 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	ADAM12	O43184	909 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	TGFB1I1	O43294	461 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	MICAL2	O94851	1124 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	RHOBTB3	O94955	611 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	FAM163B	P0C2L3	166 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	ELF1	P32519	619 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	AFM	P43652	599 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	NDUFA8	P51970	172 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	ZXDA	P98168	799 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	SPAG1	Q07617	926 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	GPR17	Q13304	367 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	KCNB1	Q14721	858 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	SV2C	Q496J9	727 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	DSTYK	Q6XUX3	929 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	XXYLT1	Q8NBI6	393 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	LEMD2	Q8NC56	503 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	BORCS6	Q96GS4	357 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	SENP8	Q96LD8	212 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	GTPBP4	Q9BZE4	634 aa	Known RBP	13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	BLZF1	Q9H2G9	400 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	PIDD1	Q9HB75	910 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	GDAP2	Q9NXN4	497 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	HSPBP1	Q9NZL4	362 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	MUTYH	Q9UIF7	546 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	SORCS3	Q9UPU3	1222 aa		13.3	□□□□□ -0.28
CLTCL1-205	ENST00000538828	WDR27	A2RRH5	827 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	PDXK	O00764	312 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	ZNF202	O95125	648 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	SPATA31D3	P0C874	917 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	SIGLEC14	Q08ET2	396 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	NFIL3	Q16649	462 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	OVOS1	Q6IE37	1185 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	KRBA2	Q6ZNG9	492 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	SPATA31D4	Q6ZUB0	917 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	DPH6	Q7L8W6	267 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	WDR49	Q8IV35	697 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	GLYCTK	Q8IVS8	523 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	C1orf127	Q8N9H9	656 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	FSIP1	Q8NA03	581 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	GLIS3	Q8NEA6	775 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	CXorf38	Q8TB03	319 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	SLC7A14	Q8TBB6	771 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	SAAL1	Q96ER3	474 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	ANKRD36BP1	Q96IX9	119 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	LRFN3	Q9BTN0	628 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	KCNH6	Q9H252	994 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	IKZF4	Q9H2S9	585 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	C11orf16	Q9NQ32	467 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	INTS13	Q9NVM9	706 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	DOCK6	Q96HP0	2047 aa		13.29	□□□□□ -0.28
CLTCL1-205	ENST00000538828	ZDBF2	Q9HCK1	2354 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	KPNA7	A9QM74	516 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	MAPK13	O15264	365 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	WEE2	P0C1S8	567 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	AP3M2	P53677	418 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	RBP5	P82980	135 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	ENPEP	Q07075	957 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	DPYD	Q12882	1025 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	STK4	Q13043	487 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	PLD1	Q13393	1074 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	MTMR3	Q13615	1198 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	PSMD6	Q15008	389 aa		13.28	□□□□□ -0.28

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