RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 SOX4Q06945 474 aaPredicted RBP12.24□□□□□ -0.45
CLPB-208ENST00000538021 TNK2Q07912 1038 aa12.24□□□□□ -0.45
CLPB-208ENST00000538021 ELF2Q15723 593 aa12.24□□□□□ -0.45
CLPB-208ENST00000538021 DCAF4L1Q3SXM0 396 aa12.24□□□□□ -0.45
CLPB-208ENST00000538021 ARHGAP29Q52LW3 1261 aa12.24□□□□□ -0.45
CLPB-208ENST00000538021 STXBP5Q5T5C0 1151 aa12.24□□□□□ -0.45
CLPB-208ENST00000538021 KIAA1211LQ6NV74 962 aa12.24□□□□□ -0.45
CLPB-208ENST00000538021 ARID3BQ8IVW6 561 aaPredicted RBP12.24□□□□□ -0.45
CLPB-208ENST00000538021 DEPTORQ8TB45 409 aa12.24□□□□□ -0.45
CLPB-208ENST00000538021 LRRC3BQ96PB8 259 aa12.24□□□□□ -0.45
CLPB-208ENST00000538021 NAP1L4Q99733 375 aaKnown RBP12.24□□□□□ -0.45
CLPB-208ENST00000538021 LOC400499M0QZD8 3231 aa12.23□□□□□ -0.45
CLPB-208ENST00000538021 ATG13O75143 517 aa12.23□□□□□ -0.45
CLPB-208ENST00000538021 RHOBTB1O94844 696 aa12.23□□□□□ -0.45
CLPB-208ENST00000538021 CAVIN2O95810 425 aa12.23□□□□□ -0.45
CLPB-208ENST00000538021 EDN1P05305 212 aa12.23□□□□□ -0.45
CLPB-208ENST00000538021 YARSP54577 528 aaKnown RBP12.23□□□□□ -0.45
CLPB-208ENST00000538021 MRPL58Q14197 206 aaKnown RBP12.23□□□□□ -0.45
CLPB-208ENST00000538021 ZNF280DQ6N043 979 aa12.23□□□□□ -0.45
CLPB-208ENST00000538021 RNF19BQ6ZMZ0 732 aa12.23□□□□□ -0.45
CLPB-208ENST00000538021 FBXL16Q8N461 479 aa12.23□□□□□ -0.45
CLPB-208ENST00000538021 MCPH1Q8NEM0 835 aa12.23□□□□□ -0.45
CLPB-208ENST00000538021 TMEM209Q96SK2 561 aa12.23□□□□□ -0.45
CLPB-208ENST00000538021 DUSP15Q9H1R2 295 aaPredicted RBP12.23□□□□□ -0.45
CLPB-208ENST00000538021 POLR3BQ9NW08 1133 aaPredicted RBP12.23□□□□□ -0.45
CLPB-208ENST00000538021 PCDHA12Q9UN75 941 aa12.23□□□□□ -0.45
CLPB-208ENST00000538021 YIPF1Q9Y548 306 aa12.23□□□□□ -0.45
CLPB-208ENST00000538021 TRIP11Q15643 1979 aa12.23□□□□□ -0.45
CLPB-208ENST00000538021 LNP1A1A4G5 178 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 DCLK1O15075 740 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 CEACAM1P13688 526 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 MCM4P33991 863 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 OSTNP61366 133 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 GRSF1Q12849 480 aaKnown RBP eCLIP12.22□□□□□ -0.45
CLPB-208ENST00000538021 UAP1L1Q3KQV9 507 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 ITPRIPL2Q3MIP1 535 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 FAM177A1Q8N128 213 aaPredicted RBP12.22□□□□□ -0.45
CLPB-208ENST00000538021 BSNDQ8WZ55 320 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 PGLYRP2Q96PD5 576 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 HHIPQ96QV1 700 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 KIFC3Q9BVG8 833 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 AGXT2Q9BYV1 514 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 CCDC113Q9H0I3 377 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 ATXN3LQ9H3M9 355 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 TMEM9BQ9NQ34 198 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 TOPORSQ9NS56 1045 aaPredicted RBP12.22□□□□□ -0.45
CLPB-208ENST00000538021 SLC38A7Q9NVC3 462 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 MAFFQ9ULX9 164 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 SNX14Q9Y5W7 946 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 ATG2BQ96BY7 2078 aa12.22□□□□□ -0.45
CLPB-208ENST00000538021 FREM2Q5SZK8 3169 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 BCLAF3A2AJT9 711 aaKnown RBP12.21□□□□□ -0.45
CLPB-208ENST00000538021 KHNYNO15037 678 aaKnown RBP12.21□□□□□ -0.45
CLPB-208ENST00000538021 RNF40O75150 1001 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 MARCKSP29966 332 aaPredicted RBP12.21□□□□□ -0.45
CLPB-208ENST00000538021 GBP1P32455 592 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 TXKP42681 527 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 EPHB3P54753 998 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 PLCB2Q00722 1185 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 PLD1Q13393 1074 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 PTPAQ15257 358 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 CALCRLQ16602 461 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 EARS2Q5JPH6 523 aaKnown RBP12.21□□□□□ -0.45
CLPB-208ENST00000538021 GPR158Q5T848 1215 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 NT5DC1Q5TFE4 455 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 ATF7IP2Q5U623 682 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 CPLX2Q6PUV4 134 aaKnown RBP12.21□□□□□ -0.45
CLPB-208ENST00000538021 APBB1IPQ7Z5R6 666 aaPredicted RBP12.21□□□□□ -0.45
CLPB-208ENST00000538021 TMC8Q8IU68 726 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 CAMKK1Q8N5S9 505 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 CEP120Q8N960 986 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 DEFB124Q8NES8 71 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 APPL2Q8NEU8 664 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 BPIFB1Q8TDL5 484 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 OXER1Q8TDS5 423 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 DDX12PQ92771 950 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 KIF12Q96FN5 646 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 LARP6Q9BRS8 491 aaKnown RBP12.21□□□□□ -0.45
CLPB-208ENST00000538021 CCDC94Q9BW85 323 aaPredicted RBP12.21□□□□□ -0.45
CLPB-208ENST00000538021 LRRC3Q9BY71 257 aa12.21□□□□□ -0.45
CLPB-208ENST00000538021 TTC12Q9H892 705 aaPredicted RBP12.21□□□□□ -0.45
CLPB-208ENST00000538021 EML5Q05BV3 1969 aa12.21□□□□□ -0.46
CLPB-208ENST00000538021 KIF26AQ9ULI4 1882 aaPredicted RBP12.21□□□□□ -0.46
CLPB-208ENST00000538021 FAM205CA6NFA0 338 aa12.2□□□□□ -0.46
CLPB-208ENST00000538021 TAF4O00268 1085 aa12.2□□□□□ -0.46
CLPB-208ENST00000538021 HYAL3O43820 417 aaPredicted RBP12.2□□□□□ -0.46
CLPB-208ENST00000538021 OR4Q2P0C623 313 aa12.2□□□□□ -0.46
CLPB-208ENST00000538021 XRCC6P12956 609 aaKnown RBP eCLIP12.2□□□□□ -0.46
CLPB-208ENST00000538021 CSRP1P21291 193 aaKnown RBP12.2□□□□□ -0.46
CLPB-208ENST00000538021 NAMPTP43490 491 aa12.2□□□□□ -0.46
CLPB-208ENST00000538021 ALDH1A3P47895 512 aa12.2□□□□□ -0.46
CLPB-208ENST00000538021 EVCP57679 992 aa12.2□□□□□ -0.46
CLPB-208ENST00000538021 CACNB1Q02641 598 aaPredicted RBP12.2□□□□□ -0.46
CLPB-208ENST00000538021 DUSP4Q13115 394 aa12.2□□□□□ -0.46
CLPB-208ENST00000538021 STK3Q13188 491 aa12.2□□□□□ -0.46
CLPB-208ENST00000538021 KARSQ15046 597 aaKnown RBP12.2□□□□□ -0.46
CLPB-208ENST00000538021 ARHGAP15Q53QZ3 475 aa12.2□□□□□ -0.46
CLPB-208ENST00000538021 TMEM196Q5HYL7 178 aa12.2□□□□□ -0.46
CLPB-208ENST00000538021 FSTL4Q6MZW2 842 aa12.2□□□□□ -0.46
CLPB-208ENST00000538021 KCNB2Q92953 911 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms