RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 GSC2O15499 205 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 PHF2O75151 1096 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 TRMUO75648 421 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 GUCY1A2P33402 732 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 EIF2B2P49770 351 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 POLR2FP61218 127 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 ASIC1P78348 528 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 XIAPP98170 497 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 AMPD3Q01432 767 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 KLRC3Q07444 240 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 FAAH2Q6GMR7 532 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 Q6ZNX1 250 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 C15orf52Q6ZUT6 534 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 OR6Y1Q8NGX8 325 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 DUSP9Q99956 384 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 RAB34Q9BZG1 259 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 SSX2IPQ9Y2D8 614 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 UQCRBP14927 111 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 UBXN2AP68543 259 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 CDC16Q13042 620 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 KRT81Q14533 505 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 TRMT5Q32P41 509 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 ANKRD40Q6AI12 368 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 VSTM1Q6UX27 236 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 TRPM4Q8TD43 1214 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 ZDHHC18Q9NUE0 388 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 DAGLAQ9Y4D2 1042 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 RNASEH1O60930 286 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 TTLL1O95922 423 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 TUBA4AP68366 448 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 PCNX4Q63HM2 1172 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 KBTBD2Q8IY47 623 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 RAB3IL1Q8TBN0 382 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 CHURC1Q8WUH1 139 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 PRMT6Q96LA8 375 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 ADAMTS1Q9UHI8 967 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 TBC1D30Q9Y2I9 924 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 WASF2Q9Y6W5 498 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 FAM47DPA6NHR8 397 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 OR6B1O95007 311 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 PGM3O95394 542 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 PPARGP37231 505 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 RPL26P61254 145 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 TMEM266Q2M3C6 531 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 FAM83AQ86UY5 434 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 SKA1Q96BD8 255 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 LSM14BQ9BX40 385 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 MAGEF1Q9HAY2 307 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 ABCB11O95342 1321 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 CFAP69A5D8W1 941 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 FKBP6O75344 327 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 OCM2P0CE71 109 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 OCMP0CE72 109 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 EEF2P13639 858 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 DNAJC3Q13217 504 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 PDK3Q15120 406 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 KCTD21Q4G0X4 260 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 SMUG1Q53HV7 270 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 SRRM1Q8IYB3 904 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 U2AF1L4Q8WU68 220 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 BAP1Q92560 729 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 ANKRD36BP1Q96IX9 119 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 LY9Q9HBG7 655 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 SPO11Q9Y5K1 396 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 RIC1Q4ADV7 1423 aa11.47□□□□□ -0.57
CLSTN3-207ENST00000537408 OXSR1O95747 527 aaPredicted RBP11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 MCM7P33993 719 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 CGB2Q6NT52 195 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 DPP9Q86TI2 863 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 MRPS26Q9BYN8 205 aaKnown RBP11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 CCDC68Q9H2F9 335 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 EPB41L4BQ9H329 900 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 UBN1Q9NPG3 1134 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 COQ6Q9Y2Z9 468 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 MYH10P35580 1976 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 TNPO2O14787 897 aaKnown RBP11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 MCF2LO15068 1137 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 ACSL3O95573 720 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 MAPK7Q13164 816 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 C16orf72Q14CZ0 275 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 ZNF394Q53GI3 561 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 CYP4F22Q6NT55 531 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 LRRC6Q86X45 466 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 ZNF398Q8TD17 642 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 ZDHHC15Q96MV8 337 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 EBF3Q9H4W6 596 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 DISC1Q9NRI5 854 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 TELO2Q9Y4R8 837 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 RPTORQ8N122 1335 aa11.46□□□□□ -0.57
CLSTN3-207ENST00000537408 T-ENOLP0DO92 83 aa11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 CALML3P27482 149 aa11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 CHRNA3P32297 505 aa11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 FAM83BQ5T0W9 1011 aa11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 NET1Q7Z628 596 aaPredicted RBP11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 MTDHQ86UE4 582 aaKnown RBP11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 ICA1LQ8NDH6 482 aa11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 KLHL4Q9C0H6 718 aa11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 RABL2AQ9UBK7 228 aaPredicted RBP11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 MTUS1Q9ULD2 1270 aa11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 V9GY48 417 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms