RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 INO80BQ9C086 356 aaPredicted RBP7.82□□□□□ -1.16
YBX3-206ENST00000536823 TMEM117Q9H0C3 514 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 NSUN3Q9H649 340 aaKnown RBP7.82□□□□□ -1.16
YBX3-206ENST00000536823 UBE2ZQ9H832 354 aaPredicted RBP7.82□□□□□ -1.16
YBX3-206ENST00000536823 XPNPEP1Q9NQW7 623 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 ANKEF1Q9NU02 776 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 DACT1Q9NYF0 836 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 NOL7Q9UMY1 257 aaKnown RBP7.82□□□□□ -1.16
YBX3-206ENST00000536823 C5orf42Q9H799 3197 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 A0A0U1RQF3 1178 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 FAM95CA0A1B0GW59 222 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 ASAP2O43150 1006 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 ITGB1P05556 798 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 LAG3P18627 525 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 RARRES1P49788 294 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 KCNQ1P51787 676 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 LAMTOR4Q0VGL1 99 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 ZNF174Q15697 407 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 KRTAP19-4Q3LI73 84 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 CLLU1OSQ5K130 101 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 FAM102BQ5T8I3 360 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 CATSPER4Q7RTX7 472 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 SRGAP1Q7Z6B7 1085 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 FERMT3Q86UX7 667 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 LRRC43Q8N309 656 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 COLGALT1Q8NBJ5 622 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 PRPF31Q8WWY3 499 aaKnown RBP7.81□□□□□ -1.16
YBX3-206ENST00000536823 RSPH1Q8WYR4 309 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 EDEM1Q92611 657 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 CASD1Q96PB1 797 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 POLR3CQ9BUI4 534 aaPredicted RBP7.81□□□□□ -1.16
YBX3-206ENST00000536823 IFT122Q9HBG6 1241 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 TUFT1Q9NNX1 390 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 OSGEPQ9NPF4 335 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 CHST12Q9NRB3 414 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 AGPAT5Q9NUQ2 364 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 POLIQ9UNA4 740 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 PLAGL2Q9UPG8 496 aa7.81□□□□□ -1.16
YBX3-206ENST00000536823 PIN4Q9Y237 131 aaKnown RBP7.81□□□□□ -1.16
YBX3-206ENST00000536823 TRIOO75962 3097 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.8□□□□□ -1.16
YBX3-206ENST00000536823 USO1O60763 962 aaKnown RBP7.8□□□□□ -1.16
YBX3-206ENST00000536823 MED24O75448 989 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 EOMESO95936 686 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 SRGAP2CP0DJJ0 459 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 XRCC6P12956 609 aaKnown RBP eCLIP7.8□□□□□ -1.16
YBX3-206ENST00000536823 DNAJB1P25685 340 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 RPA1P27694 616 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 TOB1P50616 345 aaPredicted RBP7.8□□□□□ -1.16
YBX3-206ENST00000536823 RAB27AP51159 221 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 UBE3AQ05086 875 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 DNM1Q05193 864 aaKnown RBP7.8□□□□□ -1.16
YBX3-206ENST00000536823 CAMK1Q14012 370 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 MXD4Q14582 209 aaPredicted RBP7.8□□□□□ -1.16
YBX3-206ENST00000536823 SPOUT1Q5T280 376 aaKnown RBP7.8□□□□□ -1.16
YBX3-206ENST00000536823 HAUS3Q68CZ6 603 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 TWF2Q6IBS0 349 aaKnown RBP7.8□□□□□ -1.16
YBX3-206ENST00000536823 C4orf32Q8N8J7 132 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 RNF149Q8NC42 400 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 RNF169Q8NCN4 708 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 ERMNQ8TAM6 284 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 SPPL3Q8TCT6 385 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 ASAP3Q8TDY4 903 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 PIGOQ8TEQ8 1089 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 PIK3R5Q8WYR1 880 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 UHRF1Q96T88 793 aaPredicted RBP7.8□□□□□ -1.16
YBX3-206ENST00000536823 ADAM19Q9H013 955 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 CWH43Q9H720 699 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 MINDY3Q9H8M7 445 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 ALG13Q9NP73 1137 aaKnown RBP7.8□□□□□ -1.16
YBX3-206ENST00000536823 TYW1Q9NV66 732 aaKnown RBP7.8□□□□□ -1.16
YBX3-206ENST00000536823 DBR1Q9UK59 544 aaKnown RBP7.8□□□□□ -1.16
YBX3-206ENST00000536823 PCDHB12Q9Y5F1 795 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 PLXNA4Q9HCM2 1894 aa7.8□□□□□ -1.16
YBX3-206ENST00000536823 MEGF11A6BM72 1044 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 LAD1O00515 517 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 NCK2O43639 380 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 ZNF623O75123 536 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 FGF18O76093 207 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 CSPG5O95196 566 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 PCSK2P16519 638 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 MUTP22033 750 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 KCNA5P22460 613 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 GJB2P29033 226 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 PPM1AP35813 382 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 ARL2P36404 184 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 PRPHP41219 470 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 TECP42680 631 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 PTENP60484 403 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 POU5F1BQ06416 359 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 EHHADHQ08426 723 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 HYAL1Q12794 435 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 CAPSQ13938 189 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 TFDP1Q14186 410 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 PCBP1Q15365 356 aaKnown RBP eCLIP7.79□□□□□ -1.16
YBX3-206ENST00000536823 LEXMQ3ZCV2 418 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 LRRC55Q6ZSA7 311 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 CATSPER3Q86XQ3 398 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 THNSL1Q8IYQ7 743 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 C12orf50Q8NA57 414 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms