RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 PRKCQQ04759 706 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 ALCAMQ13740 583 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 UBXN2BQ14CS0 331 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 MLF2Q15773 248 aaPredicted RBP13.54□□□□□ -0.24
PRKDC-207ENST00000536483 SLFN12LQ6IEE8 588 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 RTL10Q7L3V2 364 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 RMDN1Q96DB5 314 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 HINFPQ9BQA5 517 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 DDX23Q9BUQ8 820 aaKnown RBP13.54□□□□□ -0.24
PRKDC-207ENST00000536483 BCO2Q9BYV7 579 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 MAGEF1Q9HAY2 307 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 CPSF3Q9UKF6 684 aaKnown RBP13.54□□□□□ -0.24
PRKDC-207ENST00000536483 KCNH3Q9ULD8 1083 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 ZDHHC9Q9Y397 364 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 MRPS23Q9Y3D9 190 aaKnown RBP13.54□□□□□ -0.24
PRKDC-207ENST00000536483 BACE2Q9Y5Z0 518 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 OTOGLQ3ZCN5 2332 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 MYH15Q9Y2K3 1946 aa13.54□□□□□ -0.24
PRKDC-207ENST00000536483 FAM170BA6NMN3 283 aa13.53□□□□□ -0.24
PRKDC-207ENST00000536483 RHOP08100 348 aa13.53□□□□□ -0.24
PRKDC-207ENST00000536483 PAX3P23760 479 aa13.53□□□□□ -0.24
PRKDC-207ENST00000536483 LRPAP1P30533 357 aa13.53□□□□□ -0.24
PRKDC-207ENST00000536483 OSTNP61366 133 aa13.53□□□□□ -0.24
PRKDC-207ENST00000536483 PFKPQ01813 784 aa13.53□□□□□ -0.24
PRKDC-207ENST00000536483 ZC2HC1CQ53FD0 456 aaPredicted RBP13.53□□□□□ -0.24
PRKDC-207ENST00000536483 RESP18Q5W5W9 173 aa13.53□□□□□ -0.24
PRKDC-207ENST00000536483 POTEHQ6S545 545 aa13.53□□□□□ -0.24
PRKDC-207ENST00000536483 ANKS3Q6ZW76 656 aa13.53□□□□□ -0.24
PRKDC-207ENST00000536483 DYMQ7RTS9 669 aa13.53□□□□□ -0.24
PRKDC-207ENST00000536483 SFR1Q86XK3 245 aa13.53□□□□□ -0.24
PRKDC-207ENST00000536483 DCLK2Q8N568 766 aa13.53□□□□□ -0.24
PRKDC-207ENST00000536483 IQUBQ8NA54 791 aa13.53□□□□□ -0.24
PRKDC-207ENST00000536483 MCRS1Q96EZ8 462 aa13.53□□□□□ -0.24
PRKDC-207ENST00000536483 SPATA6Q9NWH7 488 aaPredicted RBP13.53□□□□□ -0.24
PRKDC-207ENST00000536483 ANKFY1Q9P2R3 1169 aa13.53□□□□□ -0.24
PRKDC-207ENST00000536483 PCDHA7Q9UN72 937 aa13.53□□□□□ -0.24
PRKDC-207ENST00000536483 PCDHB13Q9Y5F0 798 aa13.53□□□□□ -0.24
PRKDC-207ENST00000536483 GPR179Q6PRD1 2367 aa13.53□□□□□ -0.24
PRKDC-207ENST00000536483 NOTCH4Q99466 2003 aa13.52□□□□□ -0.24
PRKDC-207ENST00000536483 SYN3O14994 580 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 LAMTOR5O43504 91 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 TBC1D4O60343 1298 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 ADSSP30520 456 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 AARSP49588 968 aaKnown RBP eCLIP13.52□□□□□ -0.25
PRKDC-207ENST00000536483 AMPD3Q01432 767 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 ROR1Q01973 937 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 MRPL58Q14197 206 aaKnown RBP13.52□□□□□ -0.25
PRKDC-207ENST00000536483 POSTNQ15063 836 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 ENOX2Q16206 610 aaKnown RBP13.52□□□□□ -0.25
PRKDC-207ENST00000536483 SLC5A9Q2M3M2 681 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 L1TD1Q5T7N2 865 aaKnown RBP13.52□□□□□ -0.25
PRKDC-207ENST00000536483 RUBCNQ92622 972 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 BICD1Q96G01 975 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 C7orf25Q9BPX7 421 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 PYM1Q9BRP8 204 aaKnown RBP13.52□□□□□ -0.25
PRKDC-207ENST00000536483 PANK2Q9BZ23 570 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 OSBPL6Q9BZF3 934 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 PLA2G2FQ9BZM2 168 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 TRIM9Q9C026 710 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 ASB7Q9H672 318 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 LTB4R2Q9NPC1 389 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 DERAQ9Y315 318 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 CACNA1AO00555 2505 aa13.52□□□□□ -0.25
PRKDC-207ENST00000536483 MYH11P35749 1972 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 FAM237AA0A1B0GTK4 181 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 ANKRD63C9JTQ0 380 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 PODXLO00592 558 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 KINO60870 393 aaKnown RBP13.51□□□□□ -0.25
PRKDC-207ENST00000536483 ECI2O75521 394 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 LRG1P02750 347 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 CXCL8P10145 99 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 ELF1P32519 619 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 ARPP19P56211 112 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 DNM1Q05193 864 aaKnown RBP13.51□□□□□ -0.25
PRKDC-207ENST00000536483 EHHADHQ08426 723 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 VARS2Q5ST30 1063 aaKnown RBP13.51□□□□□ -0.25
PRKDC-207ENST00000536483 SLC8B1Q6J4K2 584 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 TPRG1Q6ZUI0 275 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 PDILTQ8N807 584 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 SUMF1Q8NBK3 374 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 ZNF461Q8TAF7 563 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 SUSD3Q96L08 255 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 IPO9Q96P70 1041 aaKnown RBP13.51□□□□□ -0.25
PRKDC-207ENST00000536483 MSTO1Q9BUK6 570 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 ZHX3Q9H4I2 956 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 MRPL44Q9H9J2 332 aaKnown RBP13.51□□□□□ -0.25
PRKDC-207ENST00000536483 RPF1Q9H9Y2 349 aaKnown RBP13.51□□□□□ -0.25
PRKDC-207ENST00000536483 PANK4Q9NVE7 773 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 UBQLN1Q9UMX0 589 aaKnown RBP13.51□□□□□ -0.25
PRKDC-207ENST00000536483 EXOC7Q9UPT5 735 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 FANCMQ8IYD8 2048 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 TRIP11Q15643 1979 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 MIA3Q5JRA6 1907 aa13.51□□□□□ -0.25
PRKDC-207ENST00000536483 ARHGEF37A1IGU5 675 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 WDR27A2RRH5 827 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 LACTBL1A8MY62 500 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 M0QZQ0 153 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 PRRG1O14668 218 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 XPOTO43592 962 aaKnown RBP13.5□□□□□ -0.25
PRKDC-207ENST00000536483 ABLIM3O94929 683 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms