RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 FOXN3O00409 490 aaPredicted RBP12.36□□□□□ -0.43
CDCA3-206ENST00000536241 NRP1O14786 923 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 GJB5O95377 273 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 STAU1O95793 577 aaKnown RBP12.36□□□□□ -0.43
CDCA3-206ENST00000536241 WEE2P0C1S8 567 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 KRT9P35527 623 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 PNPLA4P41247 253 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 TAF6P49848 677 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 MFAP3P55082 362 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 CDH8P55286 799 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 CCDC173Q0VFZ6 552 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 TRIM14Q14142 442 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 BTG3Q14201 252 aaPredicted RBP12.36□□□□□ -0.43
CDCA3-206ENST00000536241 ARID5BQ14865 1188 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 CD300LGQ6UXG3 332 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 ZNF397Q8NF99 534 aaPredicted RBP12.36□□□□□ -0.43
CDCA3-206ENST00000536241 PHOSPHO2Q8TCD6 241 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 HASPINQ8TF76 798 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 BAP1Q92560 729 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 IQCDQ96DY2 449 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 UROC1Q96N76 676 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 PPP1R9BQ96SB3 815 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 MMS19Q96T76 1030 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 YME1L1Q96TA2 773 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 ARID3AQ99856 593 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 STK33Q9BYT3 514 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 EDEM3Q9BZQ6 932 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 FAN1Q9Y2M0 1017 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 SNX9Q9Y5X1 595 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 CAPN15O75808 1086 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 ITGB1P05556 798 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 GALTP07902 379 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 TPM1P09493 284 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 ATP2A2P16615 1042 aaKnown RBP12.35□□□□□ -0.43
CDCA3-206ENST00000536241 BRCC3P46736 316 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 RGS19P49795 217 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 ZBED6P86452 979 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 GCNT1Q02742 428 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 CUL2Q13617 745 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 SV2CQ496J9 727 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 TIGD5Q53EQ6 642 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 RASIP1Q5U651 963 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 SCARA5Q6ZMJ2 495 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 GPIHBP1Q8IV16 184 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 HERC6Q8IVU3 1022 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 LRRC43Q8N309 656 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 TC2NQ8N9U0 490 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 RSPH1Q8WYR4 309 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 ZNF560Q96MR9 790 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 SPAG5Q96R06 1193 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 SLC9A7Q96T83 725 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 NIF3L1Q9GZT8 377 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 SDCBP2Q9H190 292 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 MTIF3Q9H2K0 278 aaKnown RBP12.35□□□□□ -0.43
CDCA3-206ENST00000536241 CWH43Q9H720 699 aa12.35□□□□□ -0.43
CDCA3-206ENST00000536241 RC3H2Q9HBD1 1191 aaKnown RBP12.35□□□□□ -0.43
CDCA3-206ENST00000536241 PRG3Q9Y2Y8 225 aaPredicted RBP12.35□□□□□ -0.43
CDCA3-206ENST00000536241 LRRC53A6NM62 1247 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 GOLGA6L6A8MZA4 724 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 I3L4J1 428 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 CYB561D2O14569 222 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 PNMA6AP0CW24 399 aaPredicted RBP12.34□□□□□ -0.43
CDCA3-206ENST00000536241 TBXAS1P24557 533 aaPredicted RBP12.34□□□□□ -0.43
CDCA3-206ENST00000536241 PBX3P40426 434 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 ASPAP45381 313 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 RAP1GAPP47736 663 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 SLC11A1P49279 550 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 ALDH7A1P49419 539 aaKnown RBP12.34□□□□□ -0.43
CDCA3-206ENST00000536241 BCAR1P56945 870 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 JAM2P57087 298 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 TNNC1P63316 161 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 HTRA4P83105 476 aaPredicted RBP12.34□□□□□ -0.43
CDCA3-206ENST00000536241 PTPRSQ13332 1948 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 SPOUT1Q5T280 376 aaKnown RBP12.34□□□□□ -0.43
CDCA3-206ENST00000536241 PDXDC1Q6P996 788 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 DSTYKQ6XUX3 929 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 CMTR2Q8IYT2 770 aaKnown RBP12.34□□□□□ -0.43
CDCA3-206ENST00000536241 OR8K1Q8NGG5 319 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 FAXDC2Q96IV6 333 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 SENP8Q96LD8 212 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 FAM81BQ96LP2 452 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 RNPC3Q96LT9 517 aaKnown RBP12.34□□□□□ -0.43
CDCA3-206ENST00000536241 RAD9AQ99638 391 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 GDF15Q99988 308 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 TMEM175Q9BSA9 504 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 COLEC11Q9BWP8 271 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 BCO2Q9BYV7 579 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 UBE2OQ9C0C9 1292 aaKnown RBP12.34□□□□□ -0.43
CDCA3-206ENST00000536241 GPR88Q9GZN0 384 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 GDAP2Q9NXN4 497 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 INSL6Q9Y581 213 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 GRXCR1A8MXD5 290 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 TLL1O43897 1013 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 MFAP3LO75121 409 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 TADA2AO75478 443 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 KIF4AO95239 1232 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 PTMAP06454 111 aaKnown RBP12.34□□□□□ -0.43
CDCA3-206ENST00000536241 P4HA1P13674 534 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 CD58P19256 250 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 ACO1P21399 889 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms