RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 GFPT2O94808 682 aa14.82□□□□□ -0.04
LIG1-203ENST00000536218 CBX6O95503 412 aa14.82□□□□□ -0.04
LIG1-203ENST00000536218 NUDT17P0C025 328 aa14.82□□□□□ -0.04
LIG1-203ENST00000536218 FUT4P22083 530 aa14.82□□□□□ -0.04
LIG1-203ENST00000536218 SLC18A3Q16572 532 aa14.82□□□□□ -0.04
LIG1-203ENST00000536218 NLRX1Q86UT6 975 aa14.82□□□□□ -0.04
LIG1-203ENST00000536218 ANKLE1Q8NAG6 615 aa14.82□□□□□ -0.04
LIG1-203ENST00000536218 ATP8B4Q8TF62 1192 aa14.82□□□□□ -0.04
LIG1-203ENST00000536218 NAP1L3Q99457 506 aaPredicted RBP14.82□□□□□ -0.04
LIG1-203ENST00000536218 SEL1LQ9UBV2 794 aa14.82□□□□□ -0.04
LIG1-203ENST00000536218 GOLGA8IPA6NC78 632 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 GOLGA8JA6NMD2 632 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 SUPT3HO75486 399 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 DR1Q01658 176 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 ZRSR2Q15696 482 aaKnown RBP14.81□□□□□ -0.04
LIG1-203ENST00000536218 ARHGAP44Q17R89 818 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 CBWD6Q4V339 395 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 CBWD3Q5JTY5 395 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 CBWD5Q5RIA9 395 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 ZNF571Q7Z3V5 609 aaPredicted RBP14.81□□□□□ -0.04
LIG1-203ENST00000536218 PPFIBP2Q8ND30 876 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 FAM192AQ9GZU8 254 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 IQCGQ9H095 443 aaKnown RBP14.81□□□□□ -0.04
LIG1-203ENST00000536218 DCLRE1BQ9H816 532 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 TMOD4Q9NZQ9 345 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 KRT13P13646 458 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 ERFP50548 548 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 PARP6Q2NL67 630 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 KCTD17Q8N5Z5 321 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 KLRG1Q96E93 195 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 CBWD1Q9BRT8 395 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 TIPINQ9BVW5 301 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 SPATA16Q9BXB7 569 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 LRMDAQ9H2I8 198 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 GPRC5DQ9NZD1 345 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 PDP2Q9P2J9 529 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 SLC16A3O15427 465 aaKnown RBP14.81□□□□□ -0.04
LIG1-203ENST00000536218 LRRN2O75325 713 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 DDNO94850 711 aaPredicted RBP14.81□□□□□ -0.04
LIG1-203ENST00000536218 TMCC1O94876 653 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 AUHQ13825 339 aaKnown RBP14.81□□□□□ -0.04
LIG1-203ENST00000536218 CMPK2Q5EBM0 449 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 IRF2BP2Q7Z5L9 587 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 APOBEC3FQ8IUX4 373 aaKnown RBP14.81□□□□□ -0.04
LIG1-203ENST00000536218 LRRC37BQ96QE4 947 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 AIPL1Q9NZN9 384 aa14.81□□□□□ -0.04
LIG1-203ENST00000536218 CAPN9O14815 690 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 CYP1A1P04798 512 aaPredicted RBP14.8□□□□□ -0.04
LIG1-203ENST00000536218 DSG3P32926 999 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 SKIV2L2P42285 1042 aaKnown RBP14.8□□□□□ -0.04
LIG1-203ENST00000536218 DLG4P78352 724 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 TMED1Q13445 227 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 RFWD3Q6PCD5 774 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 SESTD1Q86VW0 696 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 ENDOVQ8N8Q3 282 aaKnown RBP14.8□□□□□ -0.04
LIG1-203ENST00000536218 SYN2Q92777 582 aaPredicted RBP14.8□□□□□ -0.04
LIG1-203ENST00000536218 IWS1Q96ST2 819 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 PITPNM3Q9BZ71 974 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 GABBR1Q9UBS5 961 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 WDR64B1ANS9 1081 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 KRT36O76013 467 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 PENKP01210 267 aaPredicted RBP14.8□□□□□ -0.04
LIG1-203ENST00000536218 MUTP22033 750 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 FMO5P49326 533 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 DPY19L2Q6NUT2 758 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 DPY19L2P1Q6NXN4 242 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 NIPA1Q7RTP0 329 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 HAUS6Q7Z4H7 955 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 SIX2Q9NPC8 291 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 KCND2Q9NZV8 630 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 ZNF214Q9UL59 606 aaPredicted RBP14.8□□□□□ -0.04
LIG1-203ENST00000536218 FER1L6Q2WGJ9 1857 aa14.8□□□□□ -0.04
LIG1-203ENST00000536218 CCND2P30279 289 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 PSMC5P62195 406 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 SWSAP1Q6NVH7 229 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 VSIG10LQ86VR7 867 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 ARHGAP18Q8N392 663 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 FBXO41Q8TF61 875 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 SEPT11Q9NVA2 429 aaKnown RBP14.79□□□□□ -0.04
LIG1-203ENST00000536218 RBAK-RBAKDNI3L0D1 243 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 EIF4BP23588 611 aaKnown RBP14.79□□□□□ -0.04
LIG1-203ENST00000536218 NRG4Q8WWG1 115 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 SGIP1Q9BQI5 828 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 ERP44Q9BS26 406 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 TXLNGYQ9BZA5 131 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 PRKAG3Q9UGI9 489 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 ZNF112Q9UJU3 913 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 PLS3P13797 630 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 RTP1P59025 263 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 CBX3Q13185 183 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 WASHC2DQ5SRD0 308 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 RFX8Q6ZV50 586 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 CEP170P1Q96L14 293 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 GINM1Q9NU53 330 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 DNAJC12Q9UKB3 198 aa14.79□□□□□ -0.04
LIG1-203ENST00000536218 KIF13BQ9NQT8 1826 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 A6NJR5 290 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 MAP3K7O43318 606 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 ACSL3O95573 720 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 GCLMP48507 274 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms