RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 EGFLAMQ63HQ2 1017 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 PDE12Q6L8Q7 609 aaKnown RBP6.15□□□□□ -1.42
VPS33A-203ENST00000536212 XKR5Q6UX68 686 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 SLCO4C1Q6ZQN7 724 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 INTS8Q75QN2 995 aaKnown RBP6.15□□□□□ -1.42
VPS33A-203ENST00000536212 NIPA1Q7RTP0 329 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 KRTAP19-1Q8IUB9 90 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 TPH2Q8IWU9 490 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 FAM178BQ8IXR5 827 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 PRELID2Q8N945 189 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 PIGOQ8TEQ8 1089 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 FBF1Q8TES7 1133 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 CD101Q93033 1021 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 MAGOHBQ96A72 148 aaKnown RBP6.15□□□□□ -1.42
VPS33A-203ENST00000536212 SEC16BQ96JE7 1060 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 CABS1Q96KC9 395 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 ZNF317Q96PQ6 595 aaPredicted RBP6.15□□□□□ -1.42
VPS33A-203ENST00000536212 XPO6Q96QU8 1125 aaKnown RBP6.15□□□□□ -1.42
VPS33A-203ENST00000536212 RIT2Q99578 217 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 THAP2Q9H0W7 228 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 WNT8AQ9H1J5 351 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 DPH5Q9H2P9 285 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 IKZF4Q9H2S9 585 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 RANBP17Q9H2T7 1088 aaKnown RBP6.15□□□□□ -1.42
VPS33A-203ENST00000536212 PABPC3Q9H361 631 aaKnown RBP6.15□□□□□ -1.42
VPS33A-203ENST00000536212 UNC45AQ9H3U1 944 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 PIF1Q9H611 641 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 EHMT1Q9H9B1 1298 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 ERVK-5Q9HDB9 667 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 PPANQ9NQ55 473 aaKnown RBP6.15□□□□□ -1.42
VPS33A-203ENST00000536212 METTL5Q9NRN9 209 aaKnown RBP6.15□□□□□ -1.42
VPS33A-203ENST00000536212 RNF19AQ9NV58 838 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 TAS2R14Q9NYV8 317 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 WRAP73Q9P2S5 460 aaPredicted RBP6.15□□□□□ -1.42
VPS33A-203ENST00000536212 VTI1BQ9UEU0 232 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 RASAL2Q9UJF2 1139 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 COG5Q9UP83 839 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 TMX2Q9Y320 296 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 MRPL11Q9Y3B7 192 aaKnown RBP6.15□□□□□ -1.42
VPS33A-203ENST00000536212 PCDHAC2Q9Y5I4 1007 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 ALG6Q9Y672 507 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 KCNMB2Q9Y691 235 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 SYNGAP1Q96PV0 1343 aa6.15□□□□□ -1.43
VPS33A-203ENST00000536212 MYH4Q9Y623 1939 aa6.15□□□□□ -1.43
VPS33A-203ENST00000536212 ADAMTSL1Q8N6G6 1762 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 ANKRD31Q8N7Z5 1873 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 CCDC169A6NNP5 214 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 ASAP2O43150 1006 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 GAS7O60861 476 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 CPNE3O75131 537 aaKnown RBP6.14□□□□□ -1.43
VPS33A-203ENST00000536212 HIP1RO75146 1068 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 CAND2O75155 1236 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 RTN2O75298 545 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 TNFRSF21O75509 655 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 DNAJC8O75937 253 aaPredicted RBP6.14□□□□□ -1.43
VPS33A-203ENST00000536212 AGTP01019 485 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 GH2P01242 217 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 CYP1A2P05177 515 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 TRIM49P0CI25 452 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 TRIM49CP0CI26 452 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 ARP10275 920 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 KRT13P13646 458 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 TAL1P17542 331 aaPredicted RBP6.14□□□□□ -1.43
VPS33A-203ENST00000536212 CHRNB2P17787 502 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 AMPD1P23109 780 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 TMOD1P28289 359 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 HPDP32754 393 aaPredicted RBP6.14□□□□□ -1.43
VPS33A-203ENST00000536212 PDE6BP35913 854 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 MMP13P45452 471 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 DGKGP49619 791 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 CYP2J2P51589 502 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 VAMP7P51809 220 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 CDR1P51861 262 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 STAT2P52630 851 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 PMS2P54278 862 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 CACNB3P54284 484 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 DAB2P98082 770 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 ENPEPQ07075 957 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 ADCY2Q08462 1091 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 IFT88Q13099 833 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 LBRQ14739 615 aaKnown RBP6.14□□□□□ -1.43
VPS33A-203ENST00000536212 SIX1Q15475 284 aaPredicted RBP6.14□□□□□ -1.43
VPS33A-203ENST00000536212 PTPROQ16827 1216 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 CEP55Q53EZ4 464 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 ODR4Q5SWX8 454 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 SAMD5Q5TGI4 173 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 CCDC121Q6ZUS5 278 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 CYFIP1Q7L576 1253 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 PIGWQ7Z7B1 504 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 FAM160B2Q86V87 743 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 PALB2Q86YC2 1186 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 KIAA0825Q8IV33 1275 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 KSR1Q8IVT5 923 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 ARHGEF19Q8IW93 802 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 FAM71AQ8IYT1 594 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 ZDHHC14Q8IZN3 488 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 CACNA2D3Q8IZS8 1091 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 NLGN1Q8N2Q7 840 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 UBL4BQ8N7F7 174 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 C12orf50Q8NA57 414 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms