RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 MTFR1LQ9H019 292 aa17.02■□□□□ 0.32
CHMP1A-202ENST00000535997 RLFQ13129 1914 aa17.02■□□□□ 0.31
CHMP1A-202ENST00000535997 CHUKO15111 745 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 SNX3O60493 162 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 DAB2IPQ5VWQ8 1189 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 CYB5D1Q6P9G0 228 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 SLC7A3Q8WY07 619 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 ZBTB45Q96K62 511 aaPredicted RBP17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 CGRRF1Q99675 332 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 NIFKQ9BYG3 293 aaKnown RBP17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 ZNF302Q9NR11 478 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 NINJ2Q9NZG7 142 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 IP6K2Q9UHH9 426 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 HACL1Q9UJ83 578 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 ZNF541Q9H0D2 1346 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 O00370 1275 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 CDH16O75309 829 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 OATP04181 439 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 SP2Q02086 613 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 VSTM1Q6UX27 236 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 TRPM8Q7Z2W7 1104 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 PASD1Q8IV76 773 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 RCOR2Q8IZ40 523 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 RBBP8NLQ8NC74 664 aaPredicted RBP17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 CCHCR1Q8TD31 782 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 ZKSCAN4Q969J2 545 aaPredicted RBP17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 TMEM134Q9H6X4 195 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 PIM2Q9P1W9 311 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 LGALS13Q9UHV8 139 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 COL11A1P12107 1806 aaPredicted RBP17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 DOCK5Q9H7D0 1870 aa17.01■□□□□ 0.31
CHMP1A-202ENST00000535997 CNTNAP2Q9UHC6 1331 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 LRRIQ4A6NIV6 560 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 KLRC2P26717 231 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 ICAM3P32942 547 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 HMGCS2P54868 508 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 NOP14P78316 857 aaKnown RBP17■□□□□ 0.31
CHMP1A-202ENST00000535997 STAT4Q14765 748 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 STXBP2Q15833 593 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 ASAP3Q8TDY4 903 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 ZNF606Q8WXB4 792 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 TARS2Q9BW92 718 aaKnown RBP17■□□□□ 0.31
CHMP1A-202ENST00000535997 HOXC10Q9NYD6 342 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 FBXO40Q9UH90 709 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 SLC12A4Q9UP95 1085 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 NUB1Q9Y5A7 615 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 ADGRA2Q96PE1 1338 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 ATP2C2O75185 946 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 MMP8P22894 467 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 VPS41P49754 854 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 AP3M2P53677 418 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 NFX1Q12986 1120 aaKnown RBP17■□□□□ 0.31
CHMP1A-202ENST00000535997 NCOA4Q13772 614 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 HIBCHQ6NVY1 386 aaPredicted RBP17■□□□□ 0.31
CHMP1A-202ENST00000535997 DRICH1Q6PGQ1 229 aaPredicted RBP17■□□□□ 0.31
CHMP1A-202ENST00000535997 CATSPERGQ6ZRH7 1159 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 SAMD7Q7Z3H4 446 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 PARP9Q8IXQ6 854 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 FAM212AQ96EL1 285 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 KCNK9Q9NPC2 374 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 HAUS2Q9NVX0 235 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 USTQ9Y2C2 406 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 ACTL7BQ9Y614 415 aa17■□□□□ 0.31
CHMP1A-202ENST00000535997 BRAFP15056 766 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 CREB1P16220 341 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 SSR1P43307 286 aaKnown RBP16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 IZUMO3Q5VZ72 239 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 GSTA5Q7RTV2 222 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 CKAP2Q8WWK9 683 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 RBM41Q96IZ5 413 aaKnown RBP16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 IMPG2Q9BZV3 1241 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 DNAJC17Q9NVM6 304 aaKnown RBP16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 NAALADL1Q9UQQ1 740 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 TMEM191CA6NGB0 347 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 TCP11X1B4DZS4 312 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 TJP3O95049 919 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 TMEM191BP0C7N4 346 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 CD58P19256 250 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 ZNF132P52740 706 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 LRRC14Q15048 493 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 LRRC38Q5VT99 294 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 ZCCHC9Q8N567 271 aaKnown RBP16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 DNERQ8NFT8 737 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 OR5B17Q8NGF7 314 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 WRNIP1Q96S55 665 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 ANKFY1Q9P2R3 1169 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 CTNNAL1Q9UBT7 734 aa16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 USP15Q9Y4E8 981 aaPredicted RBP16.99■□□□□ 0.31
CHMP1A-202ENST00000535997 IGKV6D-21A0A0A0MT36 114 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 OAS1P00973 400 aaKnown RBP16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 ABHD2P08910 425 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 RFC5P40937 340 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 MKRN3Q13064 507 aaKnown RBP16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 SNCBQ16143 134 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 ZBTB41Q5SVQ8 909 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 ARHGEF18Q6ZSZ5 1173 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 ANKS1BQ7Z6G8 1248 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 MICALL2Q8IY33 904 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 MAGEC3Q8TD91 643 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 MGARPQ8TDB4 240 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms