RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 BIN1O00499 593 aa13.73□□□□□ -0.21
DDB1-207ENST00000535967 NRP1O14786 923 aa13.73□□□□□ -0.21
DDB1-207ENST00000535967 ALDH2P05091 517 aa13.73□□□□□ -0.21
DDB1-207ENST00000535967 RPL13P26373 211 aaKnown RBP13.73□□□□□ -0.21
DDB1-207ENST00000535967 OR1G1P47890 313 aa13.73□□□□□ -0.21
DDB1-207ENST00000535967 KRT17Q04695 432 aa13.73□□□□□ -0.21
DDB1-207ENST00000535967 TMEM132DQ14C87 1099 aa13.73□□□□□ -0.21
DDB1-207ENST00000535967 CENPPQ6IPU0 288 aa13.73□□□□□ -0.21
DDB1-207ENST00000535967 RBM43Q6ZSC3 357 aaKnown RBP13.73□□□□□ -0.21
DDB1-207ENST00000535967 SUSD6Q92537 303 aa13.73□□□□□ -0.21
DDB1-207ENST00000535967 PPP2R3CQ969Q6 453 aa13.73□□□□□ -0.21
DDB1-207ENST00000535967 SYAP1Q96A49 352 aaPredicted RBP13.73□□□□□ -0.21
DDB1-207ENST00000535967 ASIC4Q96FT7 647 aa13.73□□□□□ -0.21
DDB1-207ENST00000535967 DHTKD1Q96HY7 919 aaPredicted RBP13.73□□□□□ -0.21
DDB1-207ENST00000535967 IGSF21Q96ID5 467 aa13.73□□□□□ -0.21
DDB1-207ENST00000535967 ZMAT2Q96NC0 199 aaKnown RBP13.73□□□□□ -0.21
DDB1-207ENST00000535967 COLEC11Q9BWP8 271 aa13.73□□□□□ -0.21
DDB1-207ENST00000535967 TLE6Q9H808 572 aa13.73□□□□□ -0.21
DDB1-207ENST00000535967 CDH22Q9UJ99 828 aa13.73□□□□□ -0.21
DDB1-207ENST00000535967 SCN1AP35498 2009 aa13.72□□□□□ -0.21
DDB1-207ENST00000535967 BICDL2A1A5D9 508 aa13.72□□□□□ -0.21
DDB1-207ENST00000535967 MAPK13O15264 365 aa13.72□□□□□ -0.21
DDB1-207ENST00000535967 EXOC3O60645 756 aa13.72□□□□□ -0.21
DDB1-207ENST00000535967 BMP6P22004 513 aa13.72□□□□□ -0.21
DDB1-207ENST00000535967 NR2F2P24468 414 aa13.72□□□□□ -0.21
DDB1-207ENST00000535967 CCNE1P24864 410 aa13.72□□□□□ -0.21
DDB1-207ENST00000535967 RPL9P32969 192 aaKnown RBP13.72□□□□□ -0.21
DDB1-207ENST00000535967 PBX3P40426 434 aa13.72□□□□□ -0.21
DDB1-207ENST00000535967 ZBTB6Q15916 424 aa13.72□□□□□ -0.21
DDB1-207ENST00000535967 CCDC183Q5T5S1 534 aa13.72□□□□□ -0.21
DDB1-207ENST00000535967 JADE1Q6IE81 842 aa13.72□□□□□ -0.21
DDB1-207ENST00000535967 CBWD2Q8IUF1 395 aa13.72□□□□□ -0.21
DDB1-207ENST00000535967 GPIHBP1Q8IV16 184 aa13.72□□□□□ -0.21
DDB1-207ENST00000535967 FBXL6Q8N531 539 aa13.72□□□□□ -0.21
DDB1-207ENST00000535967 ZSWIM2Q8NEG5 633 aa13.72□□□□□ -0.21
DDB1-207ENST00000535967 BEST2Q8NFU1 509 aa13.72□□□□□ -0.21
DDB1-207ENST00000535967 NOC3LQ8WTT2 800 aaKnown RBP13.72□□□□□ -0.21
DDB1-207ENST00000535967 PHF7Q9BWX1 381 aaPredicted RBP13.72□□□□□ -0.21
DDB1-207ENST00000535967 MARCH5Q9NX47 278 aa13.72□□□□□ -0.21
DDB1-207ENST00000535967 PUF60Q9UHX1 559 aaKnown RBP13.72□□□□□ -0.21
DDB1-207ENST00000535967 PRG3Q9Y2Y8 225 aaPredicted RBP13.72□□□□□ -0.21
DDB1-207ENST00000535967 CASTOR2A6NHX0 329 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 ARHGAP33O14559 1287 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 PDGFBP01127 241 aaPredicted RBP13.71□□□□□ -0.22
DDB1-207ENST00000535967 NFICP08651 508 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 SP100P23497 879 aaPredicted RBP13.71□□□□□ -0.22
DDB1-207ENST00000535967 LRPAP1P30533 357 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 PTPN5P54829 565 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 SOX4Q06945 474 aaPredicted RBP13.71□□□□□ -0.22
DDB1-207ENST00000535967 CYP24A1Q07973 514 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 PSMD6Q15008 389 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 SPATA1Q5VX52 437 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 DMRTA1Q5VZB9 504 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 ISM2Q6H9L7 571 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 PDE12Q6L8Q7 609 aaKnown RBP13.71□□□□□ -0.22
DDB1-207ENST00000535967 DDX53Q86TM3 631 aaKnown RBP13.71□□□□□ -0.22
DDB1-207ENST00000535967 MLKLQ8NB16 471 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 MICAL1Q8TDZ2 1067 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 MKNK1Q9BUB5 465 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 APOL5Q9BWW9 433 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 TLR9Q9NR96 1032 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 TUBGCP4Q9UGJ1 667 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 DACH1Q9UI36 760 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 ADAM28Q9UKQ2 775 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 FRMD4BQ9Y2L6 1034 aa13.71□□□□□ -0.22
DDB1-207ENST00000535967 MTCL1Q9Y4B5 1905 aaKnown RBP13.7□□□□□ -0.22
DDB1-207ENST00000535967 PPP1R3GB7ZBB8 358 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 NT5C1B-RDH14C9J2C7 533 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 PODXLO00592 558 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 FSCN2O14926 492 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 GPR37O15354 613 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 KIF4AO95239 1232 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 EFEMP2O95967 443 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 PAX3P23760 479 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 ENPEPQ07075 957 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 ELAVL2Q12926 359 aaKnown RBP13.7□□□□□ -0.22
DDB1-207ENST00000535967 PAK1Q13153 545 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 KCNC3Q14003 757 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 DUSP6Q16828 381 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 UPP1Q16831 310 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 KLHL40Q2TBA0 621 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 DCLRE1AQ6PJP8 1040 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 USP37Q86T82 979 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 TMEM173Q86WV6 379 aaPredicted RBP13.7□□□□□ -0.22
DDB1-207ENST00000535967 WDR49Q8IV35 697 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 SUGP1Q8IWZ8 645 aaKnown RBP13.7□□□□□ -0.22
DDB1-207ENST00000535967 ZC3H3Q8IXZ2 948 aaKnown RBP13.7□□□□□ -0.22
DDB1-207ENST00000535967 EFCAB13Q8IY85 973 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 RNF168Q8IYW5 571 aaPredicted RBP13.7□□□□□ -0.22
DDB1-207ENST00000535967 CACTINQ8WUQ7 758 aaKnown RBP13.7□□□□□ -0.22
DDB1-207ENST00000535967 BCL7CQ8WUZ0 217 aaPredicted RBP13.7□□□□□ -0.22
DDB1-207ENST00000535967 C18orf25Q96B23 403 aaPredicted RBP13.7□□□□□ -0.22
DDB1-207ENST00000535967 HERC2P3Q9BVR0 1158 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 S1PR5Q9H228 398 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 GOLGA2P5Q9HBQ8 144 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 NPDC1Q9NQX5 325 aaPredicted RBP13.7□□□□□ -0.22
DDB1-207ENST00000535967 CTNND2Q9UQB3 1225 aa13.7□□□□□ -0.22
DDB1-207ENST00000535967 SF3B1O75533 1304 aaKnown RBP eCLIP13.7□□□□□ -0.22
DDB1-207ENST00000535967 CETN3O15182 167 aa13.69□□□□□ -0.22
DDB1-207ENST00000535967 SLC16A3O15427 465 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms