RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 ADSSP30520 456 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 MCM4P33991 863 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 OR1D2P34982 312 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 ACOT2P49753 483 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 GUCY2FP51841 1108 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 DNM1Q05193 864 aaKnown RBP9.61□□□□□ -0.87
CHD4-204ENST00000535810 SIGLEC14Q08ET2 396 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 MTMR3Q13615 1198 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 ADALQ6DHV7 355 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 SLFN12LQ6IEE8 588 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 SLC8B1Q6J4K2 584 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 SLC7A14Q8TBB6 771 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 STAMQ92783 540 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 DHX58Q96C10 678 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 SUSD3Q96L08 255 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 TSPAN18Q96SJ8 248 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 PRKD2Q9BZL6 878 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 RPF1Q9H9Y2 349 aaKnown RBP9.61□□□□□ -0.87
CHD4-204ENST00000535810 KBTBD4Q9NVX7 518 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 LIMD1Q9UGP4 676 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 SORCS3Q9UPU3 1222 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.61□□□□□ -0.87
CHD4-204ENST00000535810 DOCK8Q8NF50 2099 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 PPEF2O14830 753 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 GCNT3O95395 438 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 HNRNPA1P09651 372 aaKnown RBP eCLIP9.6□□□□□ -0.87
CHD4-204ENST00000535810 HOXA9P31269 272 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 ME1P48163 572 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 AARSP49588 968 aaKnown RBP eCLIP9.6□□□□□ -0.87
CHD4-204ENST00000535810 ROR1Q01973 937 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 ALCAMQ13740 583 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 MRPL58Q14197 206 aaKnown RBP9.6□□□□□ -0.87
CHD4-204ENST00000535810 BECN1Q14457 450 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 PPM1LQ5SGD2 360 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 L1TD1Q5T7N2 865 aaKnown RBP9.6□□□□□ -0.87
CHD4-204ENST00000535810 ATL3Q6DD88 541 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 JADE1Q6IE81 842 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 CD302Q8IX05 232 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 IQUBQ8NA54 791 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 POMGNT1Q8WZA1 660 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 PBXIP1Q96AQ6 731 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 ACSF2Q96CM8 615 aaPredicted RBP9.6□□□□□ -0.87
CHD4-204ENST00000535810 ASIC4Q96FT7 647 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 ACCSQ96QU6 501 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 TRIM9Q9C026 710 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 SMOC2Q9H3U7 446 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 CUEDC2Q9H467 287 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 PIDD1Q9HB75 910 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 PANK4Q9NVE7 773 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 FBXL5Q9UKA1 691 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 AGO2Q9UKV8 859 aaKnown RBP9.6□□□□□ -0.87
CHD4-204ENST00000535810 CFAP45Q9UL16 551 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 PCDHA7Q9UN72 937 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 EXOC7Q9UPT5 735 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 ZFHX4Q86UP3 3567 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 DOCK6Q96HP0 2047 aa9.6□□□□□ -0.87
CHD4-204ENST00000535810 EPG5Q9HCE0 2579 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 WDR27A2RRH5 827 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 H7C4K7 107 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 M0QZQ0 153 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 CCL16O15467 120 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 XPOTO43592 962 aaKnown RBP9.59□□□□□ -0.87
CHD4-204ENST00000535810 ABLIM3O94929 683 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 POU2F2P09086 479 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 PRSS12P56730 875 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 POU5F1Q01860 360 aaKnown RBP9.59□□□□□ -0.87
CHD4-204ENST00000535810 TMEM132DQ14C87 1099 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 POSTNQ15063 836 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 UVSSAQ2YD98 709 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 CTXN3Q4LDR2 81 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 SPATA1Q5VX52 437 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 RESP18Q5W5W9 173 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 ZNF280DQ6N043 979 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 CNNM4Q6P4Q7 775 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 CRELD2Q6UXH1 353 aaPredicted RBP9.59□□□□□ -0.87
CHD4-204ENST00000535810 GET4Q7L5D6 327 aaPredicted RBP9.59□□□□□ -0.87
CHD4-204ENST00000535810 SUGP1Q8IWZ8 645 aaKnown RBP9.59□□□□□ -0.87
CHD4-204ENST00000535810 PARP9Q8IXQ6 854 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 CCDC65Q8IXS2 484 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 UBALD2Q8IYN6 164 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 GLIS3Q8NEA6 775 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 APPL2Q8NEU8 664 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 BEST2Q8NFU1 509 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 ZNF461Q8TAF7 563 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 HPS3Q969F9 1004 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 MYADMQ96S97 322 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 LRRC27Q9C0I9 530 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 ASB7Q9H672 318 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 MAGEF1Q9HAY2 307 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 KCNK12Q9HB15 430 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 EPS15L1Q9UBC2 864 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 DERAQ9Y315 318 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 ZDHHC9Q9Y397 364 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 C2CD2Q9Y426 696 aa9.59□□□□□ -0.87
CHD4-204ENST00000535810 DNAH14Q0VDD8 3507 aa9.59□□□□□ -0.88
CHD4-204ENST00000535810 ANK1P16157 1881 aa9.58□□□□□ -0.88
CHD4-204ENST00000535810 CACNA1BQ00975 2339 aa9.58□□□□□ -0.88
CHD4-204ENST00000535810 PROB1E7EW31 1015 aa9.58□□□□□ -0.88
CHD4-204ENST00000535810 SPTLC1O15269 473 aa9.58□□□□□ -0.88
CHD4-204ENST00000535810 POLR2DO15514 142 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms