RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 STXBP5Q5T5C0 1151 aa11.84□□□□□ -0.51
VAMP1-204ENST00000535180 CD300LGQ6UXG3 332 aa11.84□□□□□ -0.51
VAMP1-204ENST00000535180 CDR2LQ86X02 465 aaPredicted RBP11.84□□□□□ -0.51
VAMP1-204ENST00000535180 PLEKHM2Q8IWE5 1019 aa11.84□□□□□ -0.51
VAMP1-204ENST00000535180 DAGLBQ8NCG7 672 aa11.84□□□□□ -0.51
VAMP1-204ENST00000535180 BPIFB1Q8TDL5 484 aa11.84□□□□□ -0.51
VAMP1-204ENST00000535180 ACDQ96AP0 544 aa11.84□□□□□ -0.51
VAMP1-204ENST00000535180 TMEM87BQ96K49 555 aa11.84□□□□□ -0.51
VAMP1-204ENST00000535180 LRRC3Q9BY71 257 aa11.84□□□□□ -0.51
VAMP1-204ENST00000535180 TPSD1Q9BZJ3 242 aa11.84□□□□□ -0.51
VAMP1-204ENST00000535180 MAFFQ9ULX9 164 aa11.84□□□□□ -0.51
VAMP1-204ENST00000535180 PCDHB9Q9Y5E1 797 aa11.84□□□□□ -0.51
VAMP1-204ENST00000535180 ATMQ13315 3056 aa11.83□□□□□ -0.52
VAMP1-204ENST00000535180 ADAMTS3O15072 1205 aa11.83□□□□□ -0.52
VAMP1-204ENST00000535180 B4GALT5O43286 388 aa11.83□□□□□ -0.52
VAMP1-204ENST00000535180 AMPD2Q01433 879 aa11.83□□□□□ -0.52
VAMP1-204ENST00000535180 KCNC4Q03721 635 aa11.83□□□□□ -0.52
VAMP1-204ENST00000535180 CYP4F3Q08477 520 aa11.83□□□□□ -0.52
VAMP1-204ENST00000535180 FUT2Q10981 343 aa11.83□□□□□ -0.52
VAMP1-204ENST00000535180 MXD4Q14582 209 aaPredicted RBP11.83□□□□□ -0.52
VAMP1-204ENST00000535180 PEAR1Q5VY43 1037 aaPredicted RBP11.83□□□□□ -0.52
VAMP1-204ENST00000535180 TOGARAM2Q6ZUX3 1019 aa11.83□□□□□ -0.52
VAMP1-204ENST00000535180 LPCAT2Q7L5N7 544 aa11.83□□□□□ -0.52
VAMP1-204ENST00000535180 RASSF3Q86WH2 238 aa11.83□□□□□ -0.52
VAMP1-204ENST00000535180 REXO1Q8N1G1 1221 aaKnown RBP11.83□□□□□ -0.52
VAMP1-204ENST00000535180 TSTD1Q8NFU3 115 aa11.83□□□□□ -0.52
VAMP1-204ENST00000535180 PIP4K2CQ8TBX8 421 aa11.83□□□□□ -0.52
VAMP1-204ENST00000535180 CCDC136Q96JN2 1154 aa11.83□□□□□ -0.52
VAMP1-204ENST00000535180 CEP170P1Q96L14 293 aa11.83□□□□□ -0.52
VAMP1-204ENST00000535180 GTPBP2Q9BX10 602 aaKnown RBP11.83□□□□□ -0.52
VAMP1-204ENST00000535180 CXCL16Q9H2A7 254 aa11.83□□□□□ -0.52
VAMP1-204ENST00000535180 PRORYQ9H606 182 aa11.83□□□□□ -0.52
VAMP1-204ENST00000535180 FBRSL1Q9HCM7 1045 aaKnown RBP11.83□□□□□ -0.52
VAMP1-204ENST00000535180 POLMQ9NP87 494 aaPredicted RBP11.83□□□□□ -0.52
VAMP1-204ENST00000535180 THG1LQ9NWX6 298 aaKnown RBP11.83□□□□□ -0.52
VAMP1-204ENST00000535180 SLC6A14Q9UN76 642 aa11.83□□□□□ -0.52
VAMP1-204ENST00000535180 APOBEC2Q9Y235 224 aaKnown RBP11.83□□□□□ -0.52
VAMP1-204ENST00000535180 MGAQ8IWI9 3026 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 I3L4J1 428 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 MAP3K13O43283 966 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 EDIL3O43854 480 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 CFIP05156 583 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 WEE1P30291 646 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 MCM5P33992 734 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 HOXD12P35452 270 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 PTGER3P43115 390 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 MCM2P49736 904 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 GALK1P51570 392 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 CLCNKBP51801 687 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 PTH1RQ03431 593 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 CFHR1Q03591 330 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 GFPT1Q06210 699 aaPredicted RBP11.82□□□□□ -0.52
VAMP1-204ENST00000535180 RUNX3Q13761 415 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 TFDP1Q14186 410 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 EMC2Q15006 297 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 TMPRSS7Q7RTY8 843 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 MICU3Q86XE3 530 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 TMC8Q8IU68 726 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 MINDY1Q8N5J2 469 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 CNOT6LQ96LI5 555 aaKnown RBP11.82□□□□□ -0.52
VAMP1-204ENST00000535180 CAMK1GQ96NX5 476 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 FAM83CQ9BQN1 747 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 ZMYND12Q9H0C1 365 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 OSBPL3Q9H4L5 887 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 GKN1Q9NS71 199 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 BMP2KQ9NSY1 1161 aaPredicted RBP11.82□□□□□ -0.52
VAMP1-204ENST00000535180 RBM28Q9NW13 759 aaKnown RBP11.82□□□□□ -0.52
VAMP1-204ENST00000535180 KIAA1522Q9P206 1035 aaPredicted RBP11.82□□□□□ -0.52
VAMP1-204ENST00000535180 AFF4Q9UHB7 1163 aaKnown RBP11.82□□□□□ -0.52
VAMP1-204ENST00000535180 RCAN3Q9UKA8 241 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 PILRBQ9UKJ0 227 aa11.82□□□□□ -0.52
VAMP1-204ENST00000535180 TEP1Q99973 2627 aaKnown RBP11.82□□□□□ -0.52
VAMP1-204ENST00000535180 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 ESYT2A0FGR8 921 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 TRABD2BA6NFA1 517 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 OTOL1A6NHN0 477 aaPredicted RBP11.81□□□□□ -0.52
VAMP1-204ENST00000535180 H7C4K7 107 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 SH3BP5O60239 455 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 SERPINF2P08697 491 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 BRCC3P46736 316 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 USP11P51784 963 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 SLC14A1Q13336 389 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 MRPL58Q14197 206 aaKnown RBP11.81□□□□□ -0.52
VAMP1-204ENST00000535180 UPP1Q16831 310 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 DUOXA1Q1HG43 343 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 SPDYCQ5MJ68 293 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 ARMCX6Q7L4S7 300 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 SLCO6A1Q86UG4 719 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 TMEFF1Q8IYR6 380 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 C3orf58Q8NDZ4 430 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 OLIG1Q8TAK6 271 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 CEP76Q8TAP6 659 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 P2RY13Q9BPV8 354 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 NFKBIZQ9BYH8 718 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 LNPKQ9C0E8 428 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 CAPN10Q9HC96 672 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 C6orf50Q9HD87 102 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 HPS4Q9NQG7 708 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 FSCN3Q9NQT6 498 aa11.81□□□□□ -0.52
VAMP1-204ENST00000535180 DNAAF2Q9NVR5 837 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms