RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 CCDC84Q86UT8 332 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 JAZF1Q86VZ6 243 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 NLRP14Q86W24 1093 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 BBS5Q8N3I7 341 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 IGSF22Q8N9C0 903 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 PCSK9Q8NBP7 692 aaKnown RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 FNDC8Q8TC99 324 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 SLC22A8Q8TCC7 542 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 HCAR2Q8TDS4 363 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 SEPT8Q92599 483 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 ANKS1AQ92625 1134 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 UTP4Q969X6 686 aaKnown RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 CCDC74AQ96AQ1 378 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 CIDECQ96AQ7 238 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 REXO5Q96IC2 774 aaKnown RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 METTL2AQ96IZ6 378 aaKnown RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 PPP1R13BQ96KQ4 1090 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 FAM167AQ96KS9 214 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 MYRFLQ96LU7 910 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 CTRCQ99895 268 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 TRIM56Q9BRZ2 755 aaKnown RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 SPATA16Q9BXB7 569 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 AP1M1Q9BXS5 423 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 MRPL1Q9BYD6 325 aaKnown RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 TMPRSS13Q9BYE2 586 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 CRNKL1Q9BZJ0 848 aaKnown RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 IMPG2Q9BZV3 1241 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 ZCWPW1Q9H0M4 648 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 NDST4Q9H3R1 872 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 RAD21L1Q9H4I0 556 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 DENND2DQ9H6A0 471 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 PIDD1Q9HB75 910 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 POLE3Q9NRF9 147 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 METTL5Q9NRN9 209 aaKnown RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 TRPM5Q9NZQ8 1165 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 SAMD15Q9P1V8 674 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 PPARGC1AQ9UBK2 798 aaKnown RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 KCNN3Q9UGI6 736 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 TEKT2Q9UIF3 430 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 RPL26L1Q9UNX3 145 aaKnown RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 APOBEC2Q9Y235 224 aaKnown RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 DNAJC16Q9Y2G8 782 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 TBC1D30Q9Y2I9 924 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 HBS1LQ9Y450 684 aaKnown RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 SBNO1A3KN83 1393 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 SHANK2Q9UPX8 1470 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 C1orf232A0A0U1RR37 186 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 SMIM31A0A1B0GVY4 71 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 ANO9A1A5B4 782 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 GOLGA8IPA6NC78 632 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 MAGEA13PA6NCF6 341 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 E7EVH7 732 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 K7ENM7 598 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 PSMD9O00233 223 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 ALOX15BO15296 676 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 PPIP5K2O43314 1243 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 HNRNPRO43390 633 aaKnown RBP5.51□□□□□ -1.53
SNHG1-201ENST00000535076 STX6O43752 255 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 ACSL4O60488 711 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 CCNT1O60563 726 aaKnown RBP5.51□□□□□ -1.53
SNHG1-201ENST00000535076 MAFO75444 373 aaPredicted RBP5.51□□□□□ -1.53
SNHG1-201ENST00000535076 CSPG5O95196 566 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 EPN2O95208 641 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 SNX4O95219 450 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 TIAF1O95411 115 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 CRYZL1O95825 349 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 CD4P01730 458 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 P4HBP07237 508 aaKnown RBP5.51□□□□□ -1.53
SNHG1-201ENST00000535076 RPS17P08708 135 aaKnown RBP5.51□□□□□ -1.53
SNHG1-201ENST00000535076 P4HA1P13674 534 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 ATP2A2P16615 1042 aaKnown RBP5.51□□□□□ -1.53
SNHG1-201ENST00000535076 HSPA6P17066 643 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 PRKACAP17612 351 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 ATF6P18850 670 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 HOXA6P31267 233 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 ADD2P35612 726 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 SLC1A1P43005 524 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 SRP54P61011 504 aaKnown RBP5.51□□□□□ -1.53
SNHG1-201ENST00000535076 KRT85P78386 507 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 PRKCEQ02156 737 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 PPP2R3AQ06190 1150 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 MCL1Q07820 350 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 SLFN5Q08AF3 891 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 SMARCB1Q12824 385 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 KRBOX4Q5JUW0 171 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 TCERG1LQ5VWI1 586 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 FYB2Q5VWT5 728 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 KDELC1Q6UW63 502 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 IDO2Q6ZQW0 420 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 BEND4Q6ZU67 534 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 USP50Q70EL3 339 aaPredicted RBP5.51□□□□□ -1.53
SNHG1-201ENST00000535076 UNC13DQ70J99 1090 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 PTF1AQ7RTS3 328 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 TMC7Q7Z402 723 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 USP48Q86UV5 1035 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 ZNF677Q86XU0 584 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 PALM2Q8IXS6 379 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 FAM9CQ8IZT9 166 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 SHISA5Q8N114 240 aa5.51□□□□□ -1.53
SNHG1-201ENST00000535076 NUP93Q8N1F7 819 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms