RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 MYMKA6NI61 221 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 RFPL2O75678 378 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 PFKLP17858 780 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 DDX6P26196 483 aaKnown RBP eCLIP11.26□□□□□ -0.614e-6■□□□□ 10
CSDE1-217ENST00000534699 BRCC3P46736 316 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 PRSS36Q5K4E3 855 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 C9orf57Q5W0N0 161 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 ADALQ6DHV7 355 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 SLC39A4Q6P5W5 647 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 SFR1Q86XK3 245 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 DCP1BQ8IZD4 617 aaKnown RBP11.26□□□□□ -0.61
CSDE1-217ENST00000534699 SPPL2BQ8TCT7 592 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 EPSTI1Q96J88 318 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 PLIN2Q99541 437 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 DDX23Q9BUQ8 820 aaKnown RBP11.26□□□□□ -0.61
CSDE1-217ENST00000534699 HAPLN2Q9GZV7 340 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 PANK4Q9NVE7 773 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 ATP6V1DQ9Y5K8 247 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 NOTCH4Q99466 2003 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 NPHP3-ACAD11A0A0J9YXS1 232 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 WDR27A2RRH5 827 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 PRRG1O14668 218 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 MEFVO15553 781 aaPredicted RBP11.25□□□□□ -0.61
CSDE1-217ENST00000534699 PSMD2Q13200 908 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 ARMCX5Q6P1M9 558 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 PRSS33Q8NF86 280 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 GTPBP4Q9BZE4 634 aaKnown RBP11.25□□□□□ -0.61
CSDE1-217ENST00000534699 ABCB6Q9NP58 842 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 FBXL21Q9UKT6 434 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 MRPS17Q9Y2R5 130 aaKnown RBP11.25□□□□□ -0.61
CSDE1-217ENST00000534699 NCAM2O15394 837 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 RPL17P18621 184 aaKnown RBP11.25□□□□□ -0.61
CSDE1-217ENST00000534699 AP3M2P53677 418 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 EPHB3P54753 998 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 LILRA4P59901 499 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 OSTNP61366 133 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 E2F4Q16254 413 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 OVOS1Q6IE37 1185 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 GRASPQ7Z6J2 395 aaPredicted RBP11.25□□□□□ -0.61
CSDE1-217ENST00000534699 ZNF507Q8TCN5 953 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 POMGNT1Q8WZA1 660 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 C18orf25Q96B23 403 aaPredicted RBP11.25□□□□□ -0.61
CSDE1-217ENST00000534699 GDAP2Q9NXN4 497 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 DNMT3BQ9UBC3 853 aaKnown RBP11.25□□□□□ -0.61
CSDE1-217ENST00000534699 MRPS23Q9Y3D9 190 aaKnown RBP11.25□□□□□ -0.61
CSDE1-217ENST00000534699 MYO10Q9HD67 2058 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 COL6A3P12111 3177 aa11.25□□□□□ -0.61
CSDE1-217ENST00000534699 RBAK-RBAKDNI3L0D1 243 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 MAN2B1O00754 1011 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 F13A1P00488 732 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 NMT1P30419 496 aaKnown RBP11.24□□□□□ -0.61
CSDE1-217ENST00000534699 NBL1P41271 181 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 GRIN1Q05586 938 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 BMT2Q1RMZ1 405 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 JADE1Q6IE81 842 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 LRRC15Q8TF66 581 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 HASPINQ8TF76 798 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 ZCWPW1Q9H0M4 648 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 DPP3Q9NY33 737 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 TUBGCP4Q9UGJ1 667 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 RCOR1Q9UKL0 485 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 ADAM12O43184 909 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 STAU1O95793 577 aaKnown RBP11.24□□□□□ -0.61
CSDE1-217ENST00000534699 RHOP08100 348 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 RAD51AP2Q09MP3 1159 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 NFE2Q16621 373 aaPredicted RBP11.24□□□□□ -0.61
CSDE1-217ENST00000534699 ZNF528Q3MIS6 628 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 UNC13DQ70J99 1090 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 GET4Q7L5D6 327 aaPredicted RBP11.24□□□□□ -0.61
CSDE1-217ENST00000534699 GPD1LQ8N335 351 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 TOP6BLQ8N6T0 577 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 FGF13Q92913 245 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 B3GALT6Q96L58 329 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 SENP8Q96LD8 212 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 CXCL16Q9H2A7 254 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 ZHX3Q9H4I2 956 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 GOLGA2P5Q9HBQ8 144 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 USP20Q9Y2K6 914 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 MIA3Q5JRA6 1907 aa11.24□□□□□ -0.61
CSDE1-217ENST00000534699 KIF26AQ9ULI4 1882 aaPredicted RBP11.24□□□□□ -0.61
CSDE1-217ENST00000534699 N4BP1O75113 896 aaKnown RBP11.23□□□□□ -0.61
CSDE1-217ENST00000534699 KIF20AO95235 890 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 WEE2P0C1S8 567 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 HARSP12081 509 aaKnown RBP11.23□□□□□ -0.61
CSDE1-217ENST00000534699 ALDH1A3P47895 512 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 PDZD4Q76G19 769 aaPredicted RBP11.23□□□□□ -0.61
CSDE1-217ENST00000534699 EPM2AIP1Q7L775 607 aaPredicted RBP11.23□□□□□ -0.61
CSDE1-217ENST00000534699 NPAS3Q8IXF0 933 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 SYCP3Q8IZU3 236 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 CCDC34Q96HJ3 373 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 CYP4F11Q9HBI6 524 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 POLD4Q9HCU8 107 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 ASAH2Q9NR71 780 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 EHD2Q9NZN4 543 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 COL4A2P08572 1712 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 ANKRD63C9JTQ0 380 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 CCL16O15467 120 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 GCNT3O95395 438 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 CPB1P15086 417 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 NPR3P17342 541 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms