RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 BCAS3Q9H6U6 928 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 SH2D4AQ9H788 454 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 ACAD9Q9H845 621 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 EHMT1Q9H9B1 1298 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 VTA1Q9NP79 307 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 SMC4Q9NTJ3 1288 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 DLL3Q9NYJ7 618 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 PRR13Q9NZ81 148 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 SWAP70Q9UH65 585 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 FBXO40Q9UH90 709 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 FEM1BQ9UK73 627 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 CNOT11Q9UKZ1 510 aaKnown RBP3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 SCN5AQ14524 2016 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 NBEAQ8NFP9 2946 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 CEP295Q9C0D2 2601 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 BPTFQ12830 3046 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 ATAD5Q96QE3 1844 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 SMG1Q96Q15 3661 aaKnown RBP3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 IGKV6D-41A0A0C4DH26 115 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 PTPDC1A2A3K4 754 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 C2CD4DB7Z1M9 353 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 H0Y8X5 98 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 GOLIM4O00461 696 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 ENPP3O14638 875 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 GREM1O60565 184 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 LMNAP02545 664 aaKnown RBP3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 ZNF286BP0CG31 522 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 ATF2P15336 505 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 IBSPP21815 317 aaPredicted RBP3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 ALDH5A1P51649 535 aaPredicted RBP3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 MTX1Q13505 466 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 ANGPT1Q15389 498 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 KIAA0753Q2KHM9 967 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 VWA3BQ502W6 1294 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 PLEKHG4Q58EX7 1191 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 RTP2Q5QGT7 225 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 TDRD10Q5VZ19 366 aaKnown RBP3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 SYCE2Q6PIF2 218 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 CYP2R1Q6VVX0 501 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 SLC30A10Q6XR72 485 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 SEPT14Q6ZU15 432 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 FAM9BQ8IZU0 186 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 FIBCD1Q8N539 461 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 EFHBQ8N7U6 833 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 C7orf31Q8N865 590 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 ST13P5Q8NFI4 369 aaPredicted RBP3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 CYP2W1Q8TAV3 490 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 CAGE1Q8TC20 777 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 MICAL1Q8TDZ2 1067 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 POF1BQ8WVV4 589 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 SUSD6Q92537 303 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 BRF1Q92994 677 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 CEP95Q96GE4 821 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 LOXL4Q96JB6 756 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 DNAJC2Q99543 621 aaKnown RBP3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 SLC12A9Q9BXP2 914 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 IFIH1Q9BYX4 1025 aaKnown RBP3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 RNF38Q9H0F5 515 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 TLE6Q9H808 572 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 SMPD4Q9NXE4 827 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 UBP1Q9NZI7 540 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 NYAP2Q9P242 653 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 SUCOQ9UBS9 1254 aaKnown RBP3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 GGT7Q9UJ14 662 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 TELO2Q9Y4R8 837 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 MRPL42Q9Y6G3 142 aaKnown RBP3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 SLC4A4Q9Y6R1 1079 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 PLXNA3P51805 1871 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 DSPP15924 2871 aaKnown RBP3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 ZNF236Q9UL36 1845 aa3.51□□□□□ -1.85
CHMP4A-208ENST00000534106 ZNFX1Q9P2E3 1918 aaKnown RBP3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 LAMA5O15230 3695 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 C9IYK1 514 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 C5orf67F2Z3F1 127 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 TNFRSF10CO14798 259 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 SMARCA5O60264 1052 aaPredicted RBP3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 NMT2O60551 498 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 KPNA6O60684 536 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 FSHBP01225 129 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 TP53P04637 393 aaPredicted RBP3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 GNAI2P04899 355 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 RB1P06400 928 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 CD3EP07766 207 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 MMP3P08254 477 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 ZNF16P17020 682 aaPredicted RBP3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 NCLP19338 710 aaKnown RBP3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 L1CAMP32004 1257 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 MC3RP41968 323 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 TECP42680 631 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 SARSP49591 514 aaKnown RBP3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 OAZ1P54368 228 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 ADAM17P78536 824 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 ATP8B2P98198 1209 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 POU4F1Q01851 419 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 ARHGAP1Q07960 439 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 IKQ13123 557 aaPredicted RBP3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 BTG3Q14201 252 aaPredicted RBP3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 PPP2R5BQ15173 497 aa3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 PAN2Q504Q3 1202 aaKnown RBP3.5□□□□□ -1.85
CHMP4A-208ENST00000534106 BRDTQ58F21 947 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms