RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 EVLQ9UI08 416 aaPredicted RBP7.18□□□□□ -1.26
CD44-237ENST00000534082 VWA8A3KMH1 1905 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 ZMYM2Q9UBW7 1377 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 NUP205Q92621 2012 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 STBD1O95210 358 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 APBB3O95704 486 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 CYP3A4P08684 503 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 SRGAP2CP0DJJ0 459 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 CALM1P0DP23 149 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 CALM2P0DP24 149 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 CALM3P0DP25 149 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 MYL4P12829 197 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 ENGP17813 658 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 FGFR3P22607 806 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 ELF1P32519 619 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 CLK2P49760 499 aaKnown RBP7.17□□□□□ -1.26
CD44-237ENST00000534082 JAK3P52333 1124 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 ROR1Q01973 937 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 KCNH2Q12809 1159 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 TUSC3Q13454 348 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 TEAD2Q15562 447 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 PRR16Q569H4 304 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 PLA2G4FQ68DD2 849 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 TMTC3Q6ZXV5 915 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 HAUS6Q7Z4H7 955 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 C11orf74Q86VG3 221 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 HDDC3Q8N4P3 179 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 IGDCC4Q8TDY8 1250 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 PSPC1Q8WXF1 523 aaKnown RBP7.17□□□□□ -1.26
CD44-237ENST00000534082 ADAMTS14Q8WXS8 1223 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 PIGKQ92643 395 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 HPS1Q92902 700 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 CPB2Q96IY4 423 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 ZFYVE19Q96K21 471 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 TMEM209Q96SK2 561 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 JPH2Q9BR39 696 aaPredicted RBP7.17□□□□□ -1.26
CD44-237ENST00000534082 NUSAP1Q9BXS6 441 aaKnown RBP7.17□□□□□ -1.26
CD44-237ENST00000534082 CSRNP2Q9H175 543 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 UNC45AQ9H3U1 944 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 CLMPQ9H6B4 373 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 INVSQ9Y283 1065 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 INSL5Q9Y5Q6 135 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 BACE2Q9Y5Z0 518 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 TAF6LQ9Y6J9 622 aa7.17□□□□□ -1.26
CD44-237ENST00000534082 PCNX2A6NKB5 2137 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 PIEZO2Q9H5I5 2752 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 A0A087WV48 116 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 GAS7O60861 476 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 PRKCBP05771 671 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 CYP21A2P08686 494 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 BCKDHBP21953 392 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 AXLP30530 894 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 SFNP31947 248 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 ABCG1P45844 678 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 DHPSP49366 369 aaPredicted RBP7.16□□□□□ -1.26
CD44-237ENST00000534082 DGKEP52429 567 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 SH3BP2P78314 561 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 HNRNPUQ00839 825 aaKnown RBP eCLIP7.16□□□□□ -1.26
CD44-237ENST00000534082 TNK2Q07912 1038 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 LAMTOR4Q0VGL1 99 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 GRSF1Q12849 480 aaKnown RBP eCLIP7.16□□□□□ -1.26
CD44-237ENST00000534082 ARHGAP29Q52LW3 1261 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 TMEM196Q5HYL7 178 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 ANKRD45Q5TZF3 282 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 JAKMIP3Q5VZ66 844 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 IQCEQ6IPM2 695 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 FSTL4Q6MZW2 842 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 NFXL1Q6ZNB6 911 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 RAB11FIP4Q86YS3 637 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 ELMOD1Q8N336 334 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 PNPLA1Q8N8W4 532 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 RNF149Q8NC42 400 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 NCOA7Q8NI08 942 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 SHKBP1Q8TBC3 707 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 PRPF31Q8WWY3 499 aaKnown RBP7.16□□□□□ -1.26
CD44-237ENST00000534082 SLC7A3Q8WY07 619 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 BAP1Q92560 729 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 TMEM143Q96AN5 459 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 LENG9Q96B70 501 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 TPSD1Q9BZJ3 242 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 CYP4F11Q9HBI6 524 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 ASAH2Q9NR71 780 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 EVA1BQ9NVM1 165 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 DKK4Q9UBT3 224 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 EBF1Q9UH73 591 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 CNTNAP5Q8WYK1 1306 aa7.16□□□□□ -1.26
CD44-237ENST00000534082 URB1O60287 2271 aaKnown RBP7.15□□□□□ -1.26
CD44-237ENST00000534082 SMCO2A6NFE2 343 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 CCDC69A6NI79 296 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 CFAP99D6REC4 459 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 E7EWF7 191 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 HIP1O00291 1037 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 SEC24AO95486 1093 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 NPTXRO95502 500 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 EGFP01133 1207 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 FTH1P19P0C7X4 201 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 TKTP29401 623 aaKnown RBP7.15□□□□□ -1.26
CD44-237ENST00000534082 SMCPP49901 116 aaPredicted RBP7.15□□□□□ -1.26
CD44-237ENST00000534082 ATXN3P54252 364 aaPredicted RBP7.15□□□□□ -1.26
CD44-237ENST00000534082 EPHA5P54756 1037 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms