RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 PGM2L1Q6PCE3 622 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 CERS3Q8IU89 383 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.12□□□□□ -1.599e-7■■■□□ 16.9
ITGB1-219ENST00000534049 TMEM132CQ8N3T6 1108 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 FITM2Q8N6M3 262 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 BEND2Q8NDZ0 799 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 FBXO18Q8NFZ0 1043 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 CCHCR1Q8TD31 782 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 NUP133Q8WUM0 1156 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 NEU1Q99519 415 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 ADAM2Q99965 735 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 TMEM74BQ9NUR3 256 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 TBCCD1Q9NVR7 557 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 RBM28Q9NW13 759 aaKnown RBP5.12□□□□□ -1.59
ITGB1-219ENST00000534049 SYBUQ9NX95 663 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 SIK3Q9Y2K2 1263 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 TROQ12816 1431 aaPredicted RBP5.12□□□□□ -1.59
ITGB1-219ENST00000534049 AKNAQ7Z591 1439 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 FYCO1Q9BQS8 1478 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 REREQ9P2R6 1566 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 DIP2CQ9Y2E4 1556 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 ABCA6Q8N139 1617 aa5.12□□□□□ -1.59
ITGB1-219ENST00000534049 RIMS1Q86UR5 1692 aaKnown RBP5.12□□□□□ -1.59
ITGB1-219ENST00000534049 KLHL33A6NCF5 533 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 MYADML2A6NDP7 307 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 ZAR1LA6NP61 321 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 SPDEFO95238 335 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 GPANK1O95872 356 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 EGR2P11161 476 aaPredicted RBP5.11□□□□□ -1.59
ITGB1-219ENST00000534049 CKBP12277 381 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 PCSK1P29120 753 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 SSR1P43307 286 aaKnown RBP5.11□□□□□ -1.59
ITGB1-219ENST00000534049 PTTG1IPP53801 180 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 CTXN1P60606 82 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 ATP8B2P98198 1209 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 CDC42EP1Q00587 391 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 OCA2Q04671 838 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 OS9Q13438 667 aaPredicted RBP5.11□□□□□ -1.59
ITGB1-219ENST00000534049 STRIP1Q5VSL9 837 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 FAM43BQ6ZT52 329 aaPredicted RBP5.11□□□□□ -1.59
ITGB1-219ENST00000534049 COLGALT2Q8IYK4 626 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 CMTR2Q8IYT2 770 aaKnown RBP5.11□□□□□ -1.59
ITGB1-219ENST00000534049 C1orf162Q8NEQ5 155 aaPredicted RBP5.11□□□□□ -1.59
ITGB1-219ENST00000534049 STON2Q8WXE9 905 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 PNKPQ96T60 521 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 TEX101Q9BY14 249 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 ALOXE3Q9BYJ1 711 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 C11orf54Q9H0W9 315 aaPredicted RBP5.11□□□□□ -1.59
ITGB1-219ENST00000534049 LDAHQ9H6V9 325 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 TDP1Q9NUW8 608 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 SLC23A1Q9UHI7 598 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 ZNHIT2Q9UHR6 403 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 ACTL7AQ9Y615 435 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 MYBBP1AQ9BQG0 1328 aaKnown RBP5.11□□□□□ -1.59
ITGB1-219ENST00000534049 PLCH2O75038 1416 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 MAGI2Q86UL8 1455 aa5.11□□□□□ -1.59
ITGB1-219ENST00000534049 SHTN1A0MZ66 631 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 UNC119BA6NIH7 251 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 NDUFS2O75306 463 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 HAUS5O94927 633 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 ESRRBO95718 433 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 NUDT3O95989 172 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 MTHFD1P11586 935 aaKnown RBP5.1□□□□□ -1.59
ITGB1-219ENST00000534049 FPR1P21462 350 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 FGFR4P22455 802 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 SEC24CP53992 1094 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 CXADRP78310 365 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 MPP3Q13368 585 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 TP53BP2Q13625 1128 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 RAB39AQ14964 217 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 HSP90AB4PQ58FF6 505 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 CCDC18Q5T9S5 1454 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 C9orf84Q5VXU9 1444 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 RSPH3Q86UC2 560 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 RHOT1Q8IXI2 618 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 NRG4Q8WWG1 115 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 CASKIN1Q8WXD9 1431 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 RIOX1Q9H6W3 641 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 PRDM16Q9HAZ2 1276 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 TESQ9UGI8 421 aaKnown RBP5.1□□□□□ -1.59
ITGB1-219ENST00000534049 INTUQ9ULD6 942 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 ISY1Q9ULR0 285 aaKnown RBP5.1□□□□□ -1.59
ITGB1-219ENST00000534049 DMTF1Q9Y222 760 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 MTO1Q9Y2Z2 717 aaKnown RBP5.1□□□□□ -1.59
ITGB1-219ENST00000534049 NEU2Q9Y3R4 380 aa5.1□□□□□ -1.59
ITGB1-219ENST00000534049 FER1L4A9Z1Z3 1794 aa5.09□□□□□ -1.59
ITGB1-219ENST00000534049 ITSN2Q9NZM3 1697 aa5.09□□□□□ -1.59
ITGB1-219ENST00000534049 PLXNC1O60486 1568 aa5.09□□□□□ -1.59
ITGB1-219ENST00000534049 ARHGAP5Q13017 1502 aa5.09□□□□□ -1.59
ITGB1-219ENST00000534049 ZNF518AQ6AHZ1 1483 aa5.09□□□□□ -1.59
ITGB1-219ENST00000534049 MAST3O60307 1309 aa5.09□□□□□ -1.59
ITGB1-219ENST00000534049 CCER2I3L3R5 266 aa5.09□□□□□ -1.59
ITGB1-219ENST00000534049 AMY1AP04745 511 aa5.09□□□□□ -1.59
ITGB1-219ENST00000534049 ITGAMP11215 1152 aa5.09□□□□□ -1.59
ITGB1-219ENST00000534049 CALRP27797 417 aaKnown RBP5.09□□□□□ -1.59
ITGB1-219ENST00000534049 GUCY2FP51841 1108 aa5.09□□□□□ -1.59
ITGB1-219ENST00000534049 ACAP2Q15057 778 aa5.09□□□□□ -1.59
ITGB1-219ENST00000534049 B3GNTL1Q67FW5 361 aaPredicted RBP5.09□□□□□ -1.59
ITGB1-219ENST00000534049 OLFML1Q6UWY5 402 aa5.09□□□□□ -1.59
ITGB1-219ENST00000534049 ZNF575Q86XF7 245 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms