RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	LCORL	Q8N3X6	602 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	CPEB3	Q8NE35	698 aa	Known RBP	5.73	□□□□□ -1.49
ATM-223	ENST00000533979	C1orf162	Q8NEQ5	155 aa	Predicted RBP	5.73	□□□□□ -1.49
ATM-223	ENST00000533979	ZG16B	Q96DA0	208 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	FUBP3	Q96I24	572 aa	Known RBP eCLIP	5.73	□□□□□ -1.49
ATM-223	ENST00000533979	PHACTR3	Q96KR7	559 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	C7orf25	Q9BPX7	421 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	TMEM74B	Q9NUR3	256 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	SYBU	Q9NX95	663 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	SWAP70	Q9UH65	585 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	SLC23A1	Q9UHI7	598 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	AJAP1	Q9UKB5	411 aa	Predicted RBP	5.73	□□□□□ -1.49
ATM-223	ENST00000533979	RPS6KL1	Q9Y6S9	549 aa		5.73	□□□□□ -1.49
ATM-223	ENST00000533979	GRID2IP	A4D2P6	1211 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	KLHL33	A6NCF5	533 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	MARCH11	A6NNE9	402 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	SNUPN	O95149	360 aa	Known RBP	5.72	□□□□□ -1.49
ATM-223	ENST00000533979	AMY1A	P04745	511 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	MYBL2	P10244	700 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	PF4V1	P10720	104 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	TGM1	P22735	817 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	GCSH	P23434	173 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	SERPINB3	P29508	390 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	IARS	P41252	1262 aa	Known RBP	5.72	□□□□□ -1.49
ATM-223	ENST00000533979	RAP2B	P61225	183 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	ATP8B2	P98198	1209 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	LMOD3	Q0VAK6	560 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	EPM2AIP1	Q7L775	607 aa	Predicted RBP	5.72	□□□□□ -1.49
ATM-223	ENST00000533979	MAPKAPK5	Q8IW41	473 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	CPA6	Q8N4T0	437 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	PPM1N	Q8N819	430 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	FBXO18	Q8NFZ0	1043 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	OR56A1	Q8NGH5	318 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	OR2I1P	Q8NGU4	316 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	GPR150	Q8NGU9	434 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	CCHCR1	Q8TD31	782 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	FUBP1	Q96AE4	644 aa	Known RBP	5.72	□□□□□ -1.49
ATM-223	ENST00000533979	ADAM2	Q99965	735 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	ELAC2	Q9BQ52	826 aa	Known RBP	5.72	□□□□□ -1.49
ATM-223	ENST00000533979	LDAH	Q9H6V9	325 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	MKS1	Q9NXB0	559 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	LZTS1	Q9Y250	596 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	ANKRD6	Q9Y2G4	727 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979	ACTL7A	Q9Y615	435 aa		5.72	□□□□□ -1.49
ATM-223	ENST00000533979		A0A1B0GTW7	788 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	APAF1	O14727	1248 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	ERC2	O15083	957 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	ELANE	P08246	267 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	HKR1	P10072	659 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	EGR2	P11161	476 aa	Predicted RBP	5.71	□□□□□ -1.5
ATM-223	ENST00000533979	DDC	P20711	480 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	FPR1	P21462	350 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	PCSK1	P29120	753 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	CYP2C19	P33261	490 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	ADRA1B	P35368	520 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	ALDH1A3	P47895	512 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	AVPR1B	P47901	424 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	KRT85	P78386	507 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	MTM1	Q13496	603 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	GALE	Q14376	348 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	GRM3	Q14832	879 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	SAFB	Q15424	915 aa	Known RBP eCLIP	5.71	□□□□□ -1.5
ATM-223	ENST00000533979	CLUL1	Q15846	466 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	COBLL1	Q53SF7	1204 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	WDR78	Q5VTH9	848 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	ZNF529	Q6P280	563 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	TOGARAM2	Q6ZUX3	1019 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	PAF1	Q8N7H5	531 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	ENAH	Q8N8S7	591 aa	Predicted RBP	5.71	□□□□□ -1.5
ATM-223	ENST00000533979	SUPT20H	Q8NEM7	779 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	NRG4	Q8WWG1	115 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	LINC00476	Q8WZB0	136 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	JADE3	Q92613	823 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	DPF2	Q92785	391 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	MYOC	Q99972	504 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	RNF181	Q9P0P0	153 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	SAP30BP	Q9UHR5	308 aa	Known RBP	5.71	□□□□□ -1.5
ATM-223	ENST00000533979	MAP3K2	Q9Y2U5	619 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	EPN1	Q9Y6I3	576 aa	Predicted RBP	5.71	□□□□□ -1.5
ATM-223	ENST00000533979	PDS5B	Q9NTI5	1447 aa		5.71	□□□□□ -1.5
ATM-223	ENST00000533979	MYBBP1A	Q9BQG0	1328 aa	Known RBP	5.71	□□□□□ -1.5
ATM-223	ENST00000533979	GPR32	O75388	356 aa		5.7	□□□□□ -1.5
ATM-223	ENST00000533979	MT-CO1	P00395	513 aa		5.7	□□□□□ -1.5
ATM-223	ENST00000533979	LPO	P22079	712 aa	Predicted RBP	5.7	□□□□□ -1.5
ATM-223	ENST00000533979	CCND1	P24385	295 aa		5.7	□□□□□ -1.5
ATM-223	ENST00000533979	RECQL	P46063	649 aa	Predicted RBP	5.7	□□□□□ -1.5
ATM-223	ENST00000533979	TRAPPC10	P48553	1259 aa		5.7	□□□□□ -1.5
ATM-223	ENST00000533979	ZNF280A	P59817	542 aa	Predicted RBP	5.7	□□□□□ -1.5
ATM-223	ENST00000533979	CTXN1	P60606	82 aa		5.7	□□□□□ -1.5
ATM-223	ENST00000533979	SET	Q01105	290 aa	Predicted RBP	5.7	□□□□□ -1.5
ATM-223	ENST00000533979	GTF2H3	Q13889	308 aa		5.7	□□□□□ -1.5
ATM-223	ENST00000533979	DACT2	Q5SW24	774 aa		5.7	□□□□□ -1.5
ATM-223	ENST00000533979	HECTD2	Q5U5R9	776 aa		5.7	□□□□□ -1.5
ATM-223	ENST00000533979	ANO1	Q5XXA6	986 aa		5.7	□□□□□ -1.5
ATM-223	ENST00000533979	B3GNTL1	Q67FW5	361 aa	Predicted RBP	5.7	□□□□□ -1.5
ATM-223	ENST00000533979		Q6YL49	198 aa		5.7	□□□□□ -1.5
ATM-223	ENST00000533979	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	5.7	□□□□□ -1.5
ATM-223	ENST00000533979	GJA10	Q969M2	543 aa		5.7	□□□□□ -1.5
ATM-223	ENST00000533979	RNPEP	Q9H4A4	650 aa		5.7	□□□□□ -1.5
ATM-223	ENST00000533979	GSTO2	Q9H4Y5	243 aa		5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms