RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 AOC1P19801 751 aa16.75■□□□□ 0.27
CPSF1-211ENST00000533492 PAX3P23760 479 aa16.75■□□□□ 0.27
CPSF1-211ENST00000533492 IQCEQ6IPM2 695 aa16.75■□□□□ 0.27
CPSF1-211ENST00000533492 LINC00301Q8NCQ3 95 aa16.75■□□□□ 0.27
CPSF1-211ENST00000533492 GPR152Q8TDT2 470 aa16.75■□□□□ 0.27
CPSF1-211ENST00000533492 ING5Q8WYH8 240 aa16.75■□□□□ 0.27
CPSF1-211ENST00000533492 FGF14Q92915 247 aa16.75■□□□□ 0.27
CPSF1-211ENST00000533492 DNAJC19Q96DA6 116 aa16.75■□□□□ 0.27
CPSF1-211ENST00000533492 MCRS1Q96EZ8 462 aa16.75■□□□□ 0.27
CPSF1-211ENST00000533492 ZNF512Q96ME7 567 aaPredicted RBP16.75■□□□□ 0.27
CPSF1-211ENST00000533492 CORO1BQ9BR76 489 aa16.75■□□□□ 0.27
CPSF1-211ENST00000533492 RPP25Q9BUL9 199 aaKnown RBP16.75■□□□□ 0.27
CPSF1-211ENST00000533492 DERAQ9Y315 318 aa16.75■□□□□ 0.27
CPSF1-211ENST00000533492 INSL5Q9Y5Q6 135 aa16.75■□□□□ 0.27
CPSF1-211ENST00000533492 STYXL1Q9Y6J8 313 aa16.75■□□□□ 0.27
CPSF1-211ENST00000533492 ZNF197O14709 1029 aa16.74■□□□□ 0.27
CPSF1-211ENST00000533492 NFICP08651 508 aa16.74■□□□□ 0.27
CPSF1-211ENST00000533492 PDIA4P13667 645 aaKnown RBP16.74■□□□□ 0.27
CPSF1-211ENST00000533492 NPR3P17342 541 aa16.74■□□□□ 0.27
CPSF1-211ENST00000533492 AARSP49588 968 aaKnown RBP eCLIP16.74■□□□□ 0.27
CPSF1-211ENST00000533492 LILRA4P59901 499 aa16.74■□□□□ 0.27
CPSF1-211ENST00000533492 CYP4A22Q5TCH4 519 aa16.74■□□□□ 0.27
CPSF1-211ENST00000533492 FOXD4L5Q5VV16 416 aaPredicted RBP16.74■□□□□ 0.27
CPSF1-211ENST00000533492 C9orf57Q5W0N0 161 aa16.74■□□□□ 0.27
CPSF1-211ENST00000533492 CWF19L1Q69YN2 538 aaKnown RBP16.74■□□□□ 0.27
CPSF1-211ENST00000533492 RNF19BQ6ZMZ0 732 aa16.74■□□□□ 0.27
CPSF1-211ENST00000533492 NPAS3Q8IXF0 933 aa16.74■□□□□ 0.27
CPSF1-211ENST00000533492 SYCP3Q8IZU3 236 aa16.74■□□□□ 0.27
CPSF1-211ENST00000533492 FOXD4L4Q8WXT5 416 aaPredicted RBP16.74■□□□□ 0.27
CPSF1-211ENST00000533492 LRRC27Q9C0I9 530 aa16.74■□□□□ 0.27
CPSF1-211ENST00000533492 AVENQ9NQS1 362 aaPredicted RBP16.74■□□□□ 0.27
CPSF1-211ENST00000533492 SLC2A4RGQ9NR83 387 aa16.74■□□□□ 0.27
CPSF1-211ENST00000533492 PANK4Q9NVE7 773 aa16.74■□□□□ 0.27
CPSF1-211ENST00000533492 GDE1Q9NZC3 331 aa16.74■□□□□ 0.27
CPSF1-211ENST00000533492 C2CD2Q9Y426 696 aa16.74■□□□□ 0.27
CPSF1-211ENST00000533492 A0A087X0B3 334 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 KRBA1A5PL33 1030 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 OR6C75A6NL08 312 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 PPEF2O14830 753 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 PI15O43692 258 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 PPP6R2O75170 966 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 PPP1R37O75864 691 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 ODC1P11926 461 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 TYMPP19971 482 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 GPC5P78333 572 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 POU5F1Q01860 360 aaKnown RBP16.73■□□□□ 0.27
CPSF1-211ENST00000533492 TWF1Q12792 350 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 ALCAMQ13740 583 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 L1TD1Q5T7N2 865 aaKnown RBP16.73■□□□□ 0.27
CPSF1-211ENST00000533492 OVOS1Q6IE37 1185 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 ARMCX5Q6P1M9 558 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 PDZD4Q76G19 769 aaPredicted RBP16.73■□□□□ 0.27
CPSF1-211ENST00000533492 CCDC65Q8IXS2 484 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 SENP8Q96LD8 212 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 PHOX2BQ99453 314 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 STRA6Q9BX79 667 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 IKZF4Q9H2S9 585 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 ARHGEF3Q9NR81 526 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 OLFML3Q9NRN5 406 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 FAM86C1Q9NVL1 165 aa16.73■□□□□ 0.27
CPSF1-211ENST00000533492 NOTCH4Q99466 2003 aa16.72■□□□□ 0.27
CPSF1-211ENST00000533492 PIRO00625 290 aa16.72■□□□□ 0.27
CPSF1-211ENST00000533492 IL18RAPO95256 599 aa16.72■□□□□ 0.27
CPSF1-211ENST00000533492 LDHAP00338 332 aaKnown RBP16.72■□□□□ 0.27
CPSF1-211ENST00000533492 OR4Q2P0C623 313 aa16.72■□□□□ 0.27
CPSF1-211ENST00000533492 ADSSP30520 456 aa16.72■□□□□ 0.27
CPSF1-211ENST00000533492 KCNA1Q09470 495 aa16.72■□□□□ 0.27
CPSF1-211ENST00000533492 SLC5A9Q2M3M2 681 aa16.72■□□□□ 0.27
CPSF1-211ENST00000533492 PGLYRP2Q96PD5 576 aa16.72■□□□□ 0.27
CPSF1-211ENST00000533492 KXD1Q9BQD3 176 aa16.72■□□□□ 0.27
CPSF1-211ENST00000533492 FAM213AQ9BRX8 229 aa16.72■□□□□ 0.27
CPSF1-211ENST00000533492 TBC1D17Q9HA65 648 aa16.72■□□□□ 0.27
CPSF1-211ENST00000533492 DPP3Q9NY33 737 aa16.72■□□□□ 0.27
CPSF1-211ENST00000533492 ANO9A1A5B4 782 aa16.71■□□□□ 0.27
CPSF1-211ENST00000533492 FRMD3A2A2Y4 597 aa16.71■□□□□ 0.27
CPSF1-211ENST00000533492 CUTAO60888 179 aa16.71■□□□□ 0.27
CPSF1-211ENST00000533492 YEATS4O95619 227 aa16.71■□□□□ 0.27
CPSF1-211ENST00000533492 CEBPBP17676 345 aa16.71■□□□□ 0.27
CPSF1-211ENST00000533492 AMPD3Q01432 767 aa16.71■□□□□ 0.27
CPSF1-211ENST00000533492 GPR17Q13304 367 aa16.71■□□□□ 0.27
CPSF1-211ENST00000533492 MYBPC2Q14324 1141 aa16.71■□□□□ 0.27
CPSF1-211ENST00000533492 FOXD4L6Q3SYB3 417 aaPredicted RBP16.71■□□□□ 0.27
CPSF1-211ENST00000533492 CRELD2Q6UXH1 353 aaPredicted RBP16.71■□□□□ 0.27
CPSF1-211ENST00000533492 FOXD4L3Q6VB84 417 aaPredicted RBP16.71■□□□□ 0.27
CPSF1-211ENST00000533492 STXBP4Q6ZWJ1 553 aa16.71■□□□□ 0.27
CPSF1-211ENST00000533492 METTL23Q86XA0 190 aa16.71■□□□□ 0.27
CPSF1-211ENST00000533492 NT5DC4Q86YG4 428 aa16.71■□□□□ 0.27
CPSF1-211ENST00000533492 NOC3LQ8WTT2 800 aaKnown RBP16.71■□□□□ 0.27
CPSF1-211ENST00000533492 SHDQ96IW2 340 aa16.71■□□□□ 0.27
CPSF1-211ENST00000533492 TNMDQ9H2S6 317 aa16.71■□□□□ 0.27
CPSF1-211ENST00000533492 TMEM206Q9H813 350 aa16.71■□□□□ 0.27
CPSF1-211ENST00000533492 ASAH2Q9NR71 780 aa16.71■□□□□ 0.27
CPSF1-211ENST00000533492 DSEQ9UL01 958 aa16.71■□□□□ 0.27
CPSF1-211ENST00000533492 CACNA1HO95180 2353 aa16.71■□□□□ 0.26
CPSF1-211ENST00000533492 CYB561D2O14569 222 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 SPTLC1O15269 473 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 MICAL2O94851 1124 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 PRPF6O94906 941 aaKnown RBP16.7■□□□□ 0.26
CPSF1-211ENST00000533492 ZSCAN22P10073 491 aaPredicted RBP16.7■□□□□ 0.26
CPSF1-211ENST00000533492 MYL4P12829 197 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms