RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 SLC11A1P49279 550 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 ZNF75DP51815 510 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 LRMPQ12912 555 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 RAPGEF1Q13905 1077 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 NR1I3Q14994 352 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 KIAA1841Q6NSI8 718 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 TMCO2Q7Z6W1 182 aaPredicted RBP12.19□□□□□ -0.46
GMDS-210ENST00000533279 ZNF280BQ86YH2 543 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 TMEM86AQ8N2M4 240 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 COLGALT1Q8NBJ5 622 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 SPATA18Q8TC71 538 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 NAP1L5Q96NT1 182 aaPredicted RBP12.19□□□□□ -0.46
GMDS-210ENST00000533279 TGS1Q96RS0 853 aaKnown RBP12.19□□□□□ -0.46
GMDS-210ENST00000533279 C11orf84Q9BUA3 381 aaPredicted RBP12.19□□□□□ -0.46
GMDS-210ENST00000533279 PLVAPQ9BX97 442 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 NUCKS1Q9H1E3 243 aaKnown RBP12.19□□□□□ -0.46
GMDS-210ENST00000533279 SNX25Q9H3E2 840 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 VRTNQ9H8Y1 702 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 SLC28A3Q9HAS3 691 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 CYP3A43Q9HB55 503 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 PLCB1Q9NQ66 1216 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 FAM207AQ9NSI2 230 aaPredicted RBP12.19□□□□□ -0.46
GMDS-210ENST00000533279 SIX4Q9UIU6 781 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 SSX2IPQ9Y2D8 614 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 COL4A6Q14031 1691 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 ANK1P16157 1881 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 PDCD11Q14690 1871 aaKnown RBP12.19□□□□□ -0.46
GMDS-210ENST00000533279 FSD2A1L4K1 749 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 H7C4K7 107 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 CYB561D2O14569 222 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 MEFVO15553 781 aaPredicted RBP12.18□□□□□ -0.46
GMDS-210ENST00000533279 VNN1O95497 513 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 ADCY5O95622 1261 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 URODP06132 367 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 GALTP07902 379 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 PON1P27169 355 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 CDC25BP30305 580 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 CA8P35219 290 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 AFF1P51825 1210 aaKnown RBP12.18□□□□□ -0.46
GMDS-210ENST00000533279 LILRA4P59901 499 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 GCNT1Q02742 428 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 CREMQ03060 361 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 SOX4Q06945 474 aaPredicted RBP12.18□□□□□ -0.46
GMDS-210ENST00000533279 NAB2Q15742 525 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 PPP2R2DQ66LE6 453 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 SMYD5Q6GMV2 418 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 SCARA5Q6ZMJ2 495 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 DPH6Q7L8W6 267 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 APTXQ7Z2E3 356 aaKnown RBP12.18□□□□□ -0.46
GMDS-210ENST00000533279 TMC6Q7Z403 805 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 THEM5Q8N1Q8 247 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 TOP6BLQ8N6T0 577 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 SP7Q8TDD2 431 aaPredicted RBP12.18□□□□□ -0.46
GMDS-210ENST00000533279 HASPINQ8TF76 798 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 JAKMIP2Q96AA8 810 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 PI4K2AQ9BTU6 479 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 EDEM3Q9BZQ6 932 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 CWH43Q9H720 699 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 RC3H2Q9HBD1 1191 aaKnown RBP12.18□□□□□ -0.46
GMDS-210ENST00000533279 UBE2TQ9NPD8 197 aaPredicted RBP12.18□□□□□ -0.46
GMDS-210ENST00000533279 ZNHIT6Q9NWK9 470 aaKnown RBP12.18□□□□□ -0.46
GMDS-210ENST00000533279 GDAP2Q9NXN4 497 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 CEP72Q9P209 647 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 PCDH10Q9P2E7 1040 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 DNAJB4Q9UDY4 337 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 CEP290O15078 2479 aa12.18□□□□□ -0.46
GMDS-210ENST00000533279 FNDC1Q4ZHG4 1894 aaPredicted RBP12.17□□□□□ -0.46
GMDS-210ENST00000533279 SYN3O14994 580 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 TEX33O43247 280 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 CST3P01034 146 aaPredicted RBP12.17□□□□□ -0.46
GMDS-210ENST00000533279 RB1P06400 928 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 CA3P07451 260 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 FAM163BP0C2L3 166 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 SLC9A1P19634 815 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 PCSK1P29120 753 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 USP8P40818 1118 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 LHX1P48742 406 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 RABGGTBP53611 331 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 POLR2FP61218 127 aaKnown RBP12.17□□□□□ -0.46
GMDS-210ENST00000533279 SMAD3P84022 425 aaKnown RBP12.17□□□□□ -0.46
GMDS-210ENST00000533279 TSPY1Q01534 308 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 CUL2Q13617 745 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 USP41Q3LFD5 358 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 PRPF38BQ5VTL8 546 aaKnown RBP12.17□□□□□ -0.46
GMDS-210ENST00000533279 FUT10Q6P4F1 479 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.17□□□□□ -0.46
GMDS-210ENST00000533279 CNGA4Q8IV77 575 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 VSTM4Q8IW00 320 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 ADGRF2Q8IZF7 708 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 SEMA4DQ92854 862 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 CLP1Q92989 425 aaKnown RBP12.17□□□□□ -0.46
GMDS-210ENST00000533279 IGSF21Q96ID5 467 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 SUSD3Q96L08 255 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 SENP8Q96LD8 212 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 OXCT2Q9BYC2 517 aaPredicted RBP12.17□□□□□ -0.46
GMDS-210ENST00000533279 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.17□□□□□ -0.46
GMDS-210ENST00000533279 FBXL5Q9UKA1 691 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 PCDHB8Q9UN66 801 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 PDE4DIPQ5VU43 2346 aa12.17□□□□□ -0.46
GMDS-210ENST00000533279 TRIP11Q15643 1979 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms