RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 AKAP5P24588 427 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 MPLP40238 635 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 SYKP43405 635 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 FXR2P51116 673 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 PDIA5Q14554 519 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 PRSS36Q5K4E3 855 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 CCDC183Q5T5S1 534 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 VITQ6UXI7 678 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 SLFN12Q8IYM2 578 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 SYNPOQ8N3V7 929 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 ETNPPLQ8TBG4 499 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 HASPINQ8TF76 798 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 CPB2Q96IY4 423 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 CEP170P1Q96L14 293 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 PAAF1Q9BRP4 392 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 SCNM1Q9BWG6 230 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 DHX33Q9H6R0 707 aaKnown RBP12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 TTC12Q9H892 705 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 PARP2Q9UGN5 583 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 PCDHA12Q9UN75 941 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 ANKRD11Q6UB99 2663 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 ASPMQ8IZT6 3477 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 ARHGEF37A1IGU5 675 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 CASTOR2A6NHX0 329 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 PP2D1A8MPX8 630 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 INO80B-WBP1J3KQ70 363 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 GIPC1O14908 333 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 KIF4AO95239 1232 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 CCDC192P0DO97 292 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 CDC25AP30304 524 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 UBA7P41226 1012 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 KPNA1P52294 538 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 NPEPPSP55786 919 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 PTENP60484 403 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 MXD4Q14582 209 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 CAMK4Q16566 473 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 CYP4A22Q5TCH4 519 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 SH3PXD2AQ5TCZ1 1133 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 B3GNT9Q6UX72 402 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 PDZD4Q76G19 769 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 KBTBD6Q86V97 674 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 MFSD6LQ8IWD5 586 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 FAM200AQ8TCP9 573 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 E2F7Q96AV8 911 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 ZC3H10Q96K80 434 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 AK8Q96MA6 479 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 CORO1BQ9BR76 489 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 EDEM2Q9BV94 578 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 NUP62CLQ9H1M0 184 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 CLSTN2Q9H4D0 955 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 RBM12Q9NTZ6 932 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 KLK14Q9P0G3 267 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 MTRRQ9UBK8 725 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 CACNG4Q9UBN1 327 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 LRWD1Q9UFC0 647 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 CDY1Q9Y6F8 540 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 COL4A2P08572 1712 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 FRYQ5TBA9 3013 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 WDR27A2RRH5 827 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 C4orf47A7E2U8 309 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 PRRG1O14668 218 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 POLR2DO15514 142 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 FGFR3P22607 806 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 ELF1P32519 619 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 QARSP47897 775 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 POU5F1BQ06416 359 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 TFDP1Q14186 410 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 ZSCAN23Q3MJ62 389 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 SLC27A1Q6PCB7 646 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 Q6ZS52 159 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 YAF2Q8IY57 180 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 PDILTQ8N807 584 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 IGSF22Q8N9C0 903 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 ZNF461Q8TAF7 563 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 TIGD1Q96MW7 591 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 RAB34Q9BZG1 259 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 CCSER1Q9C0I3 900 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 SMOC1Q9H4F8 434 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 TRPV4Q9HBA0 871 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 BACE2Q9Y5Z0 518 aa12.37□□□□□ -0.43
TRAPPC4-213ENST00000533149 ZFYVE26Q68DK2 2539 aa12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 TICRRQ7Z2Z1 1910 aa12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 CEP295Q9C0D2 2601 aa12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 A0A087X0B3 334 aa12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 ARNTLO00327 626 aa12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 LETM1O95202 739 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 THP07101 528 aa12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 ARF4P18085 180 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 CSRP1P21291 193 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 TXLNAP40222 546 aa12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 EMC2Q15006 297 aa12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 ANKS3Q6ZW76 656 aa12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 OTUD6AQ7L8S5 288 aa12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 RALGPS2Q86X27 583 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 IFNLR1Q8IU57 520 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 ELMOD1Q8N336 334 aa12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 LEMD2Q8NC56 503 aa12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 DHX58Q96C10 678 aa12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 TCEAL4Q96EI5 215 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms