RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 ALDH1A1P00352 501 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 SCP2P22307 547 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 DSG3P32926 999 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 STILQ15468 1287 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 NFRKBQ6P4R8 1299 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 DDX42Q86XP3 938 aaKnown RBP eCLIP9.18□□□□□ -0.94
CTNND1-232ENST00000532649 WNT8AQ9H1J5 351 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 GTSE1Q9NYZ3 720 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 AARSP49588 968 aaKnown RBP eCLIP9.18□□□□□ -0.943e-6■□□□□ 10.9
CTNND1-232ENST00000532649 CARSP49589 748 aaKnown RBP9.18□□□□□ -0.94
CTNND1-232ENST00000532649 GABPB1Q06547 395 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-232ENST00000532649 PCNX4Q63HM2 1172 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 CLEC17AQ6ZS10 378 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 ACAD11Q709F0 780 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 TRIML2Q8N7C3 387 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 BCAS4Q8TDM0 211 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 PCDHGB4Q9UN71 923 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-232ENST00000532649 A0A1B0GW55 424 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 ANO9A1A5B4 782 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 MANSC4A6NHS7 340 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-232ENST00000532649 DFFAO00273 331 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 CXCL11O14625 94 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 MED24O75448 989 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 APOA4P06727 396 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 DUX4L2P0CJ85 424 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 DUX4L3P0CJ86 424 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 DUX4L4P0CJ87 422 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 DUX4L5P0CJ88 424 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 DUX4L6P0CJ89 424 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 DUX4L7P0CJ90 424 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 CLCN3P51790 818 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 ROR1Q01973 937 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 PHKG1Q16816 387 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 USP50Q70EL3 339 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-232ENST00000532649 C16orf62Q7Z3J2 963 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 SAMD3Q8N6K7 520 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 ING2Q9H160 280 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 PLEKHA5Q9HAU0 1116 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 FAM49BQ9NUQ9 324 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 DUX4Q9UBX2 424 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 TUBE1Q9UJT0 475 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 TBX20Q9UMR3 447 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 CAMTA1Q9Y6Y1 1673 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 PI4K2BG5E9Z4 385 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 IMPDH2P12268 514 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 UCHL3P15374 230 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 FKBP1AP62942 108 aaKnown RBP9.17□□□□□ -0.94
CTNND1-232ENST00000532649 ZNF484Q5JVG2 852 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 TEDDM1Q5T9Z0 273 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 MOXD1Q6UVY6 613 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 MAML1Q92585 1016 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 TMEM8AQ9HCN3 771 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 DMAP1Q9NPF5 467 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-232ENST00000532649 GPRC5CQ9NQ84 441 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 ADGRG1Q9Y653 693 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 SNRPFP62306 86 aaKnown RBP9.17□□□□□ -0.94
CTNND1-232ENST00000532649 MGAT5BQ3V5L5 792 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 SYTL5Q8TDW5 730 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-232ENST00000532649 IDI2Q9BXS1 227 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 KLK14Q9P0G3 267 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.17□□□□□ -0.943e-9■□□□□ 10.4
CTNND1-232ENST00000532649 KPNA7A9QM74 516 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 HMBSP08397 361 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 GRB10Q13322 594 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 CDCA5Q96FF9 252 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 OSBPL9Q96SU4 736 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 NT5C1AQ9BXI3 368 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 RIOX1Q9H6W3 641 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 C17orf75Q9HAS0 396 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 PAPOLBQ9NRJ5 636 aaKnown RBP9.17□□□□□ -0.94
CTNND1-232ENST00000532649 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-232ENST00000532649 C5orf58C9J3I9 102 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 PRR23D1E9PI22 279 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-232ENST00000532649 WEE2P0C1S8 567 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 PRR23D2P0DMB1 279 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-232ENST00000532649 MAP4P27816 1152 aaKnown RBP9.17□□□□□ -0.94
CTNND1-232ENST00000532649 RASSF3Q86WH2 238 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 USP6NLQ92738 828 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 FOPNLQ96NB1 174 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 IL17RBQ9NRM6 502 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 TSR3Q9UJK0 312 aaKnown RBP9.17□□□□□ -0.94
CTNND1-232ENST00000532649 PRG3Q9Y2Y8 225 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-232ENST00000532649 TPI1P60174 286 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 PDCLQ13371 301 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 FSCBQ5H9T9 825 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 C16orf87Q6PH81 154 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 CDKL3Q8IVW4 592 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-232ENST00000532649 PI4K2AQ9BTU6 479 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 FHOD1Q9Y613 1164 aa9.17□□□□□ -0.94
CTNND1-232ENST00000532649 A0A1B0GTH6 734 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 WDR91A4D1P6 747 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 DCDC2CA8MYV0 355 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 VWA5AO00534 786 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 VTNP04004 478 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 PCSK1P29120 753 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 ZNF235Q14590 738 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 SEZ6Q53EL9 994 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 ITPRIPL1Q6GPH6 555 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 RASGRP2Q7LDG7 609 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms