RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 PPCSQ9HAB8 311 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 CFAP69A5D8W1 941 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 APRTP07741 180 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 TAF11Q15544 211 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 ITPRIPL1Q6GPH6 555 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 KLC3Q6P597 504 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 GTF3C2Q8WUA4 911 aaPredicted RBP16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 RSAD1Q9HA92 442 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 APOBEC2Q9Y235 224 aaKnown RBP16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 FIS1Q9Y3D6 152 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 CFAP73A6NFT4 308 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 WNT10BO00744 389 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 MEIS2O14770 477 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 TFRCP02786 760 aaKnown RBP16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 GLI1P08151 1106 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 CRY2Q49AN0 593 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 MUM1L1Q5H9M0 696 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 PID1Q7Z2X4 250 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 DEFB132Q7Z7B7 95 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 DNAAF5Q86Y56 855 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 SLC13A1Q9BZW2 595 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 ABT1Q9ULW3 272 aaKnown RBP16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 ARL2BPQ9Y2Y0 163 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 KPNA7A9QM74 516 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 F5H423 210 aaPredicted RBP16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 H3BQF6 201 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 PLCB4Q15147 1175 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 C4orf50Q6ZRC1 276 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 NUDCD3Q8IVD9 361 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 PRPF31Q8WWY3 499 aaKnown RBP16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 LRRC4BQ9NT99 713 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 EPS15L1Q9UBC2 864 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 PPP1R12AO14974 1030 aaPredicted RBP16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 FAM107AO95990 144 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 TM4SF1P30408 202 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 LAMC2Q13753 1193 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 SPATA18Q8TC71 538 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 ARL8AQ96BM9 186 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 FSD1LQ9BXM9 530 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 BCL9LQ86UU0 1499 aa16.12■□□□□ 0.17
PCDHA3-202ENST00000532566 SPECC1L-ADORA2AF8WAN1 911 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 PSTPIP1O43586 416 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 RRM1P23921 792 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 JADE1Q6IE81 842 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 PSMC3IPQ9P2W1 217 aaPredicted RBP16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 AFDNP55196 1824 aaKnown RBP16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 CYP3A7-CYP3A51PA0A087WV96 503 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 CYP3A7P24462 503 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 SMTNL2Q2TAL5 461 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 C2CD6Q53TS8 623 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 MIIPQ5JXC2 388 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 LRRC31Q6UY01 552 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 SLC47A2Q86VL8 602 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 APPL2Q8NEU8 664 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 HPDLQ96IR7 371 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 TMEM120BA0PK00 339 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 FAM47DPA6NHR8 397 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 SMAPO00193 183 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 GRAP2O75791 330 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 SKIP12755 728 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 PMLP29590 882 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 TGFB2P61812 414 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 PTGISQ16647 500 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 KDM7AQ6ZMT4 941 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 C4orf32Q8N8J7 132 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 GPRC5AQ8NFJ5 357 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 CAVIN3Q969G5 261 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 LRGUKQ96M69 825 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 CGRRF1Q99675 332 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 MMTAG2Q9BU76 263 aaKnown RBP16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 ADAM33Q9BZ11 813 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 FAM49BQ9NUQ9 324 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 FNDC3AQ9Y2H6 1198 aaKnown RBP16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 LMO7Q8WWI1 1683 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 DDX3XO00571 662 aaKnown RBP eCLIP16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 PLSCR1O15162 318 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 COPS2P61201 443 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 PLCD3Q8N3E9 789 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 FBXO25Q8TCJ0 367 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 MTMR12Q9C0I1 747 aa16.11■□□□□ 0.17
PCDHA3-202ENST00000532566 ZBTB39O15060 712 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 S100BP04271 92 aaPredicted RBP16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 RBBP5Q15291 538 aaKnown RBP16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 CYP4A22Q5TCH4 519 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 WDR59Q6PJI9 974 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 ATP6V1E2Q96A05 226 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 ALKBH8Q96BT7 664 aaKnown RBP16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 MYCBPQ99417 103 aaPredicted RBP16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 GOLGA8RI6L899 631 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 ITGB3P05106 788 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 RARBP10826 455 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 TYK2P29597 1187 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 C11orf63Q6NUN7 778 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 C4orf33Q8N1A6 199 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 CYFIP2Q96F07 1278 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 USP15Q9Y4E8 981 aaPredicted RBP16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 TCHHQ07283 1943 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 CD4P01730 458 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 GCKP35557 465 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms