RNA–Protein interactions for RNA: ENST00000532451.1

SORL1-210, Transcript of sortilin related receptor 1, humanhuman

TSL 1 (best)

Gene SORL1, Length 2,165 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-210ENST00000532451 FAM107AO95990 144 aa25.06■■□□□ 1.6
SORL1-210ENST00000532451 FGFR4P22455 802 aa25.06■■□□□ 1.6
SORL1-210ENST00000532451 IREB2P48200 963 aaKnown RBP25.06■■□□□ 1.6
SORL1-210ENST00000532451 TAS2R40P59535 323 aa25.06■■□□□ 1.6
SORL1-210ENST00000532451 TRIM50Q86XT4 487 aa25.06■■□□□ 1.6
SORL1-210ENST00000532451 RNF149Q8NC42 400 aa25.06■■□□□ 1.6
SORL1-210ENST00000532451 GRK7Q8WTQ7 553 aa25.06■■□□□ 1.6
SORL1-210ENST00000532451 FGD4Q96M96 766 aa25.06■■□□□ 1.6
SORL1-210ENST00000532451 O00370 1275 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 TLR3O15455 904 aaKnown RBP25.05■■□□□ 1.6
SORL1-210ENST00000532451 DDNO94850 711 aaPredicted RBP25.05■■□□□ 1.6
SORL1-210ENST00000532451 PGK2P07205 417 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 PAEPP09466 180 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 MCL1Q07820 350 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 PTK6Q13882 451 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 MAPK6Q16659 721 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 HSDL1Q3SXM5 330 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 CELF3Q5SZQ8 465 aaKnown RBP25.05■■□□□ 1.6
SORL1-210ENST00000532451 UBAP2Q5T6F2 1119 aaKnown RBP25.05■■□□□ 1.6
SORL1-210ENST00000532451 KCNV1Q6PIU1 500 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 CROCCP2Q86T23 111 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 CCDC50Q8IVM0 306 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 KATNAL2Q8IYT4 538 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 LRRC71Q8N4P6 559 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 CNOT10Q9H9A5 744 aaKnown RBP25.05■■□□□ 1.6
SORL1-210ENST00000532451 PARVAQ9NVD7 372 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 ASIC3Q9UHC3 531 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 IGKV6-21A0A0C4DH24 114 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 ZBTB42B2RXF5 422 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 NOP56O00567 594 aaKnown RBP25.05■■□□□ 1.6
SORL1-210ENST00000532451 ABLIM1O14639 778 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 RALAP11233 206 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 MAGEA9P43362 315 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 PPARDQ03181 441 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 KLF1Q13351 362 aaPredicted RBP25.05■■□□□ 1.6
SORL1-210ENST00000532451 SURF1Q15526 300 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 SPATS2Q86XZ4 545 aaKnown RBP25.05■■□□□ 1.6
SORL1-210ENST00000532451 EXOC8Q8IYI6 725 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 FEZF2Q8TBJ5 459 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 FAM212AQ96EL1 285 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 TMEM109Q9BVC6 243 aa25.05■■□□□ 1.6
SORL1-210ENST00000532451 CPSF3Q9UKF6 684 aaKnown RBP25.05■■□□□ 1.6
SORL1-210ENST00000532451 MYL6P60660 151 aa25.04■■□□□ 1.6
SORL1-210ENST00000532451 ADCY2Q08462 1091 aa25.04■■□□□ 1.6
SORL1-210ENST00000532451 PLPPR4Q7Z2D5 763 aa25.04■■□□□ 1.6
SORL1-210ENST00000532451 C2orf40Q9H1Z8 148 aa25.04■■□□□ 1.6
SORL1-210ENST00000532451 R3HDM2Q9Y2K5 976 aaKnown RBP25.04■■□□□ 1.6
SORL1-210ENST00000532451 GMNCA6NCL1 334 aa25.04■■□□□ 1.6
SORL1-210ENST00000532451 TP73O15350 636 aa25.04■■□□□ 1.6
SORL1-210ENST00000532451 TRAPPC3O43617 180 aa25.04■■□□□ 1.6
SORL1-210ENST00000532451 GAS8O95995 478 aa25.04■■□□□ 1.6
SORL1-210ENST00000532451 ITIH2P19823 946 aa25.04■■□□□ 1.6
SORL1-210ENST00000532451 MMP8P22894 467 aa25.04■■□□□ 1.6
SORL1-210ENST00000532451 DUOXA2Q1HG44 320 aa25.04■■□□□ 1.6
SORL1-210ENST00000532451 ERO1BQ86YB8 467 aa25.04■■□□□ 1.6
SORL1-210ENST00000532451 SNF8Q96H20 258 aa25.04■■□□□ 1.6
SORL1-210ENST00000532451 HEMGNQ9BXL5 484 aa25.04■■□□□ 1.6
SORL1-210ENST00000532451 NIF3L1Q9GZT8 377 aa25.04■■□□□ 1.6
SORL1-210ENST00000532451 HOMER3Q9NSC5 361 aa25.04■■□□□ 1.6
SORL1-210ENST00000532451 USTQ9Y2C2 406 aa25.04■■□□□ 1.6
SORL1-210ENST00000532451 TLDC2A0PJX2 215 aa25.03■■□□□ 1.6
SORL1-210ENST00000532451 CXCL11O14625 94 aa25.03■■□□□ 1.6
SORL1-210ENST00000532451 GJB6O95452 261 aa25.03■■□□□ 1.6
SORL1-210ENST00000532451 CDR1P51861 262 aa25.03■■□□□ 1.6
SORL1-210ENST00000532451 PLCB4Q15147 1175 aa25.03■■□□□ 1.6
SORL1-210ENST00000532451 C6orf118Q5T5N4 469 aa25.03■■□□□ 1.6
SORL1-210ENST00000532451 RHBDF2Q6PJF5 856 aa25.03■■□□□ 1.6
SORL1-210ENST00000532451 CCDC25Q86WR0 208 aa25.03■■□□□ 1.6
SORL1-210ENST00000532451 ATL2Q8NHH9 583 aa25.03■■□□□ 1.6
SORL1-210ENST00000532451 ATXN2Q99700 1313 aaKnown RBP25.03■■□□□ 1.6
SORL1-210ENST00000532451 RGS16O15492 202 aaPredicted RBP25.03■■□□□ 1.6
SORL1-210ENST00000532451 SGSM1Q2NKQ1 1148 aa25.03■■□□□ 1.6
SORL1-210ENST00000532451 TRMT10CQ7L0Y3 403 aaKnown RBP25.03■■□□□ 1.6
SORL1-210ENST00000532451 EXD1Q8NHP7 514 aa25.03■■□□□ 1.6
SORL1-210ENST00000532451 CLMNQ96JQ2 1002 aa25.03■■□□□ 1.6
SORL1-210ENST00000532451 TXNRD2Q9NNW7 524 aa25.03■■□□□ 1.6
SORL1-210ENST00000532451 IP6K2Q9UHH9 426 aa25.03■■□□□ 1.6
SORL1-210ENST00000532451 AGTPBP1Q9UPW5 1226 aa25.03■■□□□ 1.6
SORL1-210ENST00000532451 CD58P19256 250 aa25.02■■□□□ 1.6
SORL1-210ENST00000532451 IVDP26440 423 aa25.02■■□□□ 1.6
SORL1-210ENST00000532451 SSR1P43307 286 aaKnown RBP25.02■■□□□ 1.6
SORL1-210ENST00000532451 ZNF568Q3ZCX4 644 aa25.02■■□□□ 1.6
SORL1-210ENST00000532451 UHMK1Q8TAS1 419 aaKnown RBP25.02■■□□□ 1.6
SORL1-210ENST00000532451 CCDC114Q96M63 670 aa25.02■■□□□ 1.6
SORL1-210ENST00000532451 OSBPL8Q9BZF1 889 aa25.02■■□□□ 1.6
SORL1-210ENST00000532451 AAASQ9NRG9 546 aa25.02■■□□□ 1.6
SORL1-210ENST00000532451 CISHQ9NSE2 258 aa25.02■■□□□ 1.6
SORL1-210ENST00000532451 LSM8O95777 96 aaKnown RBP25.01■■□□□ 1.59
SORL1-210ENST00000532451 CALB1P05937 261 aa25.01■■□□□ 1.59
SORL1-210ENST00000532451 TRPC3Q13507 836 aa25.01■■□□□ 1.59
SORL1-210ENST00000532451 CCNG2Q16589 344 aa25.01■■□□□ 1.59
SORL1-210ENST00000532451 RHPN2Q8IUC4 686 aa25.01■■□□□ 1.59
SORL1-210ENST00000532451 C3orf20Q8ND61 904 aa25.01■■□□□ 1.59
SORL1-210ENST00000532451 RAPGEF5Q92565 580 aa25.01■■□□□ 1.59
SORL1-210ENST00000532451 SPATA33Q96N06 139 aa25.01■■□□□ 1.59
SORL1-210ENST00000532451 JPH2Q9BR39 696 aaPredicted RBP25.01■■□□□ 1.59
SORL1-210ENST00000532451 SMIM23A6NLE4 172 aa25.01■■□□□ 1.59
SORL1-210ENST00000532451 AGTP01019 485 aa25.01■■□□□ 1.59
SORL1-210ENST00000532451 HOXC6P09630 235 aa25.01■■□□□ 1.59
SORL1-210ENST00000532451 PROZP22891 400 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms