RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 PRR23AA6NEV1 266 aa8.41□□□□□ -1.06
CTNND1-230ENST00000532245 SPATA31C2B4DYI2 1134 aa8.41□□□□□ -1.06
CTNND1-230ENST00000532245 ACKR2O00590 384 aa8.41□□□□□ -1.06
CTNND1-230ENST00000532245 RTN2O75298 545 aa8.41□□□□□ -1.06
CTNND1-230ENST00000532245 MYL6P60660 151 aa8.41□□□□□ -1.06
CTNND1-230ENST00000532245 CCL14Q16627 93 aa8.41□□□□□ -1.06
CTNND1-230ENST00000532245 CEP85LQ5SZL2 805 aa8.41□□□□□ -1.06
CTNND1-230ENST00000532245 NXNQ6DKJ4 435 aa8.41□□□□□ -1.06
CTNND1-230ENST00000532245 LPPQ93052 612 aa8.41□□□□□ -1.06
CTNND1-230ENST00000532245 HDAC11Q96DB2 347 aa8.41□□□□□ -1.06
CTNND1-230ENST00000532245 ZBTB45Q96K62 511 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-230ENST00000532245 CGRRF1Q99675 332 aa8.41□□□□□ -1.06
CTNND1-230ENST00000532245 LCMT1Q9UIC8 334 aa8.41□□□□□ -1.06
CTNND1-230ENST00000532245 H0Y626 953 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 GOLGA8MH3BSY2 632 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 AXLP30530 894 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 NR1H3Q13133 447 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 CDH18Q13634 790 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 SPOPLQ6IQ16 392 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 LLGL2Q6P1M3 1020 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 SPDYE1Q8NFV5 336 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-230ENST00000532245 HELQQ8TDG4 1101 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 EPB41L5Q9HCM4 733 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 SARS2Q9NP81 518 aaKnown RBP8.4□□□□□ -1.06
CTNND1-230ENST00000532245 TSR3Q9UJK0 312 aaKnown RBP8.4□□□□□ -1.06
CTNND1-230ENST00000532245 PCDHB2Q9Y5E7 798 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 SHPRHQ149N8 1683 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 F8W8V4 182 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 PI4K2BG5E9Z4 385 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 PIK3CDO00329 1044 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 ASMTLO95671 621 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 MMP3P08254 477 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 EIF4BP23588 611 aaKnown RBP8.4□□□□□ -1.06
CTNND1-230ENST00000532245 LHX1P48742 406 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 HIRAP54198 1017 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-230ENST00000532245 TAP1Q03518 808 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 RHOT1Q8IXI2 618 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 KIAA0319LQ8IZA0 1049 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 ARHGAP18Q8N392 663 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 ELMO3Q96BJ8 720 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 NUDCD1Q96RS6 583 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 TTC7AQ9ULT0 858 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-230ENST00000532245 ITGB5P18084 799 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 KLK7P49862 253 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 DR1Q01658 176 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 IQCB1Q15051 598 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 HSDL1Q3SXM5 330 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 RBM23Q86U06 439 aaKnown RBP8.4□□□□□ -1.06
CTNND1-230ENST00000532245 TTC13Q8NBP0 860 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 C1orf131Q8NDD1 294 aaKnown RBP8.4□□□□□ -1.06
CTNND1-230ENST00000532245 EXT2Q93063 718 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 CYFIP2Q96F07 1278 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 CHMP6Q96FZ7 201 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 ZNF558Q96NG5 402 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 SLC28A3Q9HAS3 691 aa8.4□□□□□ -1.06
CTNND1-230ENST00000532245 PACSIN2Q9UNF0 486 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-230ENST00000532245 EEF2KO00418 725 aaKnown RBP8.4□□□□□ -1.07
CTNND1-230ENST00000532245 APOL1O14791 398 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 SEPT4O43236 478 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 RECQL4O94761 1208 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 PNMA6AP0CW24 399 aaPredicted RBP8.4□□□□□ -1.07
CTNND1-230ENST00000532245 HSPA6P17066 643 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 SERPINB6P35237 376 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 MRPS25P82663 173 aaKnown RBP8.4□□□□□ -1.07
CTNND1-230ENST00000532245 PPM1LQ5SGD2 360 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 PID1Q7Z2X4 250 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 TRAPPC11Q7Z392 1133 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 ASAP3Q8TDY4 903 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 DEPDC1BQ8WUY9 529 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 N4BP2L2Q92802 583 aaPredicted RBP8.4□□□□□ -1.07
CTNND1-230ENST00000532245 ATXN3LQ9H3M9 355 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 RABEP2Q9H5N1 569 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 CERS4Q9HA82 394 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 METTL5Q9NRN9 209 aaKnown RBP8.4□□□□□ -1.07
CTNND1-230ENST00000532245 WDR35Q9P2L0 1181 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 CDC23Q9UJX2 597 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 FBXL21Q9UKT6 434 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 ST3GAL5Q9UNP4 418 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 A0A1W2PQC6 194 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 LACTBL1A8MY62 500 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 MIF4GDA9UHW6 222 aaKnown RBP8.4□□□□□ -1.07
CTNND1-230ENST00000532245 CYP24A1Q07973 514 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 EFEMP1Q12805 493 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 EFHC1Q5JVL4 640 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 JADE1Q6IE81 842 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 TAS2R42Q7RTR8 314 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 WDR49Q8IV35 697 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 PDIK1LQ8N165 341 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 PPTC7Q8NI37 304 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 CCHCR1Q8TD31 782 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 GIPC2Q8TF65 315 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 RNPEPQ9H4A4 650 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 DNAJC18Q9H819 358 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 RBPJLQ9UBG7 517 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 LIMA1Q9UHB6 759 aaKnown RBP8.4□□□□□ -1.07
CTNND1-230ENST00000532245 CHORDC1Q9UHD1 332 aaPredicted RBP8.4□□□□□ -1.07
CTNND1-230ENST00000532245 TLK1Q9UKI8 766 aa8.4□□□□□ -1.07
CTNND1-230ENST00000532245 PODXLO00592 558 aa8.39□□□□□ -1.07
CTNND1-230ENST00000532245 ATMINO43313 823 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-230ENST00000532245 PSMD10O75832 226 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms