RNA–Protein interactions for RNA: ENST00000531590.1

LRFN4-203, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 3

Gene LRFN4, Length 274 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-203ENST00000531590 CBWD3Q5JTY5 395 aa17.56■□□□□ 0.4
LRFN4-203ENST00000531590 CBWD5Q5RIA9 395 aa17.56■□□□□ 0.4
LRFN4-203ENST00000531590 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.56■□□□□ 0.4
LRFN4-203ENST00000531590 CEP57Q86XR8 500 aa17.56■□□□□ 0.4
LRFN4-203ENST00000531590 TRIM59Q8IWR1 403 aa17.56■□□□□ 0.4
LRFN4-203ENST00000531590 MRPL43Q8N983 215 aaKnown RBP17.56■□□□□ 0.4
LRFN4-203ENST00000531590 SENP8Q96LD8 212 aa17.56■□□□□ 0.4
LRFN4-203ENST00000531590 TTPALQ9BTX7 342 aa17.56■□□□□ 0.4
LRFN4-203ENST00000531590 XYLT2Q9H1B5 865 aa17.56■□□□□ 0.4
LRFN4-203ENST00000531590 TMEM8AQ9HCN3 771 aa17.56■□□□□ 0.4
LRFN4-203ENST00000531590 NGRNQ9NPE2 291 aaKnown RBP17.56■□□□□ 0.4
LRFN4-203ENST00000531590 STK39Q9UEW8 545 aa17.56■□□□□ 0.4
LRFN4-203ENST00000531590 TIMM13Q9Y5L4 95 aaPredicted RBP17.56■□□□□ 0.4
LRFN4-203ENST00000531590 TRANK1O15050 2925 aa17.56■□□□□ 0.4
LRFN4-203ENST00000531590 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.55■□□□□ 0.4
LRFN4-203ENST00000531590 C2orf71A6NGG8 1288 aa17.55■□□□□ 0.4
LRFN4-203ENST00000531590 KPNA7A9QM74 516 aa17.55■□□□□ 0.4
LRFN4-203ENST00000531590 TRAPPC3O43617 180 aa17.55■□□□□ 0.4
LRFN4-203ENST00000531590 PHACTR2O75167 634 aa17.55■□□□□ 0.4
LRFN4-203ENST00000531590 LRRN2O75325 713 aa17.55■□□□□ 0.4
LRFN4-203ENST00000531590 GTF2H1P32780 548 aa17.55■□□□□ 0.4
LRFN4-203ENST00000531590 PNPLA4P41247 253 aa17.55■□□□□ 0.4
LRFN4-203ENST00000531590 MXI1P50539 228 aa17.55■□□□□ 0.4
LRFN4-203ENST00000531590 MYL5Q02045 173 aa17.55■□□□□ 0.4
LRFN4-203ENST00000531590 NCOA4Q13772 614 aa17.55■□□□□ 0.4
LRFN4-203ENST00000531590 SMC1AQ14683 1233 aaKnown RBP17.55■□□□□ 0.4
LRFN4-203ENST00000531590 SV2CQ496J9 727 aa17.55■□□□□ 0.4
LRFN4-203ENST00000531590 PRSS55Q6UWB4 352 aaPredicted RBP17.55■□□□□ 0.4
LRFN4-203ENST00000531590 DSTYKQ6XUX3 929 aa17.55■□□□□ 0.4
LRFN4-203ENST00000531590 MICALL1Q8N3F8 863 aa17.55■□□□□ 0.4
LRFN4-203ENST00000531590 LNX1Q8TBB1 728 aaPredicted RBP17.55■□□□□ 0.4
LRFN4-203ENST00000531590 TAS1R2Q8TE23 839 aa17.55■□□□□ 0.4
LRFN4-203ENST00000531590 RIN2Q8WYP3 895 aaPredicted RBP17.55■□□□□ 0.4
LRFN4-203ENST00000531590 HPDLQ96IR7 371 aa17.55■□□□□ 0.4
LRFN4-203ENST00000531590 PCDHB8Q9UN66 801 aa17.55■□□□□ 0.4
LRFN4-203ENST00000531590 XIRP2A4UGR9 3374 aa17.55■□□□□ 0.4
LRFN4-203ENST00000531590 SYN3O14994 580 aa17.54■□□□□ 0.4
LRFN4-203ENST00000531590 HLA-DRAP01903 254 aa17.54■□□□□ 0.4
LRFN4-203ENST00000531590 CA8P35219 290 aa17.54■□□□□ 0.4
LRFN4-203ENST00000531590 TRPC3Q13507 836 aa17.54■□□□□ 0.4
LRFN4-203ENST00000531590 TCEAL5Q5H9L2 206 aa17.54■□□□□ 0.4
LRFN4-203ENST00000531590 VARS2Q5ST30 1063 aaKnown RBP17.54■□□□□ 0.4
LRFN4-203ENST00000531590 KRT39Q6A163 491 aa17.54■□□□□ 0.4
LRFN4-203ENST00000531590 PDE12Q6L8Q7 609 aaKnown RBP17.54■□□□□ 0.4
LRFN4-203ENST00000531590 KIAA1841Q6NSI8 718 aa17.54■□□□□ 0.4
LRFN4-203ENST00000531590 CREBRFQ8IUR6 639 aa17.54■□□□□ 0.4
LRFN4-203ENST00000531590 AOPEPQ8N6M6 819 aa17.54■□□□□ 0.4
LRFN4-203ENST00000531590 PIK3R5Q8WYR1 880 aa17.54■□□□□ 0.4
LRFN4-203ENST00000531590 SEMA4DQ92854 862 aa17.54■□□□□ 0.4
LRFN4-203ENST00000531590 BPIFA3Q9BQP9 254 aa17.54■□□□□ 0.4
LRFN4-203ENST00000531590 HSD3B7Q9H2F3 369 aa17.54■□□□□ 0.4
LRFN4-203ENST00000531590 NSUN3Q9H649 340 aaKnown RBP17.54■□□□□ 0.4
LRFN4-203ENST00000531590 MRPL17Q9NRX2 175 aaKnown RBP17.54■□□□□ 0.4
LRFN4-203ENST00000531590 FANCLQ9NW38 375 aa17.54■□□□□ 0.4
LRFN4-203ENST00000531590 IRAK3Q9Y616 596 aa17.54■□□□□ 0.4
LRFN4-203ENST00000531590 ANK1P16157 1881 aa17.54■□□□□ 0.4
LRFN4-203ENST00000531590 NLRC5Q86WI3 1866 aa17.54■□□□□ 0.4
LRFN4-203ENST00000531590 TDRD15B5MCY1 1934 aaKnown RBP17.53■□□□□ 0.4
LRFN4-203ENST00000531590 CYB561D2O14569 222 aa17.53■□□□□ 0.4
LRFN4-203ENST00000531590 PER2O15055 1255 aa17.53■□□□□ 0.4
LRFN4-203ENST00000531590 STAU1O95793 577 aaKnown RBP17.53■□□□□ 0.4
LRFN4-203ENST00000531590 CNPP09543 421 aaKnown RBP17.53■□□□□ 0.4
LRFN4-203ENST00000531590 RPL17P18621 184 aaKnown RBP17.53■□□□□ 0.4
LRFN4-203ENST00000531590 PAX3P23760 479 aa17.53■□□□□ 0.4
LRFN4-203ENST00000531590 GTF2F1P35269 517 aaKnown RBP eCLIP17.53■□□□□ 0.4
LRFN4-203ENST00000531590 PIK3CAP42336 1068 aa17.53■□□□□ 0.4
LRFN4-203ENST00000531590 ZNF165P49910 485 aa17.53■□□□□ 0.4
LRFN4-203ENST00000531590 MYO1EQ12965 1108 aa17.53■□□□□ 0.4
LRFN4-203ENST00000531590 MRPL58Q14197 206 aaKnown RBP17.53■□□□□ 0.4
LRFN4-203ENST00000531590 CDKAL1Q5VV42 579 aa17.53■□□□□ 0.4
LRFN4-203ENST00000531590 SPOPLQ6IQ16 392 aa17.53■□□□□ 0.4
LRFN4-203ENST00000531590 RSPO2Q6UXX9 243 aaPredicted RBP17.53■□□□□ 0.4
LRFN4-203ENST00000531590 DHX40Q8IX18 779 aaKnown RBP17.53■□□□□ 0.4
LRFN4-203ENST00000531590 PI4K2AQ9BTU6 479 aa17.53■□□□□ 0.4
LRFN4-203ENST00000531590 NAT10Q9H0A0 1025 aaKnown RBP17.53■□□□□ 0.4
LRFN4-203ENST00000531590 VRTNQ9H8Y1 702 aa17.53■□□□□ 0.4
LRFN4-203ENST00000531590 RXFP1Q9HBX9 757 aa17.53■□□□□ 0.4
LRFN4-203ENST00000531590 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.53■□□□□ 0.49e-36■■■■■ 857.1
LRFN4-203ENST00000531590 GDAP2Q9NXN4 497 aa17.53■□□□□ 0.4
LRFN4-203ENST00000531590 R3HCC1Q9Y3T6 440 aaKnown RBP17.53■□□□□ 0.4
LRFN4-203ENST00000531590 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.53■□□□□ 0.4
LRFN4-203ENST00000531590 SNX9Q9Y5X1 595 aa17.53■□□□□ 0.4
LRFN4-203ENST00000531590 CITO14578 2027 aa17.53■□□□□ 0.4
LRFN4-203ENST00000531590 PDCD11Q14690 1871 aaKnown RBP17.52■□□□□ 0.4
LRFN4-203ENST00000531590 PLXNA4Q9HCM2 1894 aa17.52■□□□□ 0.4
LRFN4-203ENST00000531590 ADAM12O43184 909 aa17.52■□□□□ 0.4
LRFN4-203ENST00000531590 STX10O60499 249 aa17.52■□□□□ 0.4
LRFN4-203ENST00000531590 ODC1P11926 461 aa17.52■□□□□ 0.4
LRFN4-203ENST00000531590 TYMPP19971 482 aa17.52■□□□□ 0.4
LRFN4-203ENST00000531590 FMO5P49326 533 aa17.52■□□□□ 0.4
LRFN4-203ENST00000531590 HYAL1Q12794 435 aa17.52■□□□□ 0.4
LRFN4-203ENST00000531590 KCNH2Q12809 1159 aa17.52■□□□□ 0.4
LRFN4-203ENST00000531590 BMS1Q14692 1282 aaKnown RBP17.52■□□□□ 0.4
LRFN4-203ENST00000531590 PSMD5Q16401 504 aa17.52■□□□□ 0.4
LRFN4-203ENST00000531590 ZNF699Q32M78 642 aa17.52■□□□□ 0.4
LRFN4-203ENST00000531590 WSCD1Q658N2 575 aa17.52■□□□□ 0.4
LRFN4-203ENST00000531590 RBM23Q86U06 439 aaKnown RBP17.52■□□□□ 0.4
LRFN4-203ENST00000531590 GPR65Q8IYL9 337 aa17.52■□□□□ 0.4
LRFN4-203ENST00000531590 KLHL5Q96PQ7 755 aa17.52■□□□□ 0.4
LRFN4-203ENST00000531590 APOBEC3GQ9HC16 384 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms