RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 RPA1P27694 616 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 RPL9P32969 192 aaKnown RBP10.1□□□□□ -0.79
NEDD8-206ENST00000531430 GRM5P41594 1212 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 ALDH1A3P47895 512 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 DUSP4Q13115 394 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 PTGDRQ13258 359 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 ZRSR1Q15695 479 aaKnown RBP10.1□□□□□ -0.79
NEDD8-206ENST00000531430 DGKKQ5KSL6 1271 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 DSTYKQ6XUX3 929 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 MAMSTRQ6ZN01 415 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 HAUS6Q7Z4H7 955 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 USP37Q86T82 979 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 ARID3BQ8IVW6 561 aaPredicted RBP10.1□□□□□ -0.79
NEDD8-206ENST00000531430 SHKBP1Q8TBC3 707 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 KIFAP3Q92845 792 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 TNFRSF25Q93038 417 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 E2F7Q96AV8 911 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 RSPRY1Q96DX4 576 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 ZBTB45Q96K62 511 aaPredicted RBP10.1□□□□□ -0.79
NEDD8-206ENST00000531430 ACO2Q99798 780 aaKnown RBP10.1□□□□□ -0.79
NEDD8-206ENST00000531430 MRPL4Q9BYD3 311 aaKnown RBP10.1□□□□□ -0.79
NEDD8-206ENST00000531430 GPR88Q9GZN0 384 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 TRPV5Q9NQA5 729 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 KMT5AQ9NQR1 393 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 C2orf42Q9NWW7 574 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 SPECC1L-ADORA2AF8WAN1 911 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 CHADO15335 359 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 JAK2O60674 1132 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 OR52Z1P0C646 297 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 YWHAHQ04917 246 aaPredicted RBP10.09□□□□□ -0.79
NEDD8-206ENST00000531430 GNL2Q13823 731 aaKnown RBP10.09□□□□□ -0.79
NEDD8-206ENST00000531430 MRPL58Q14197 206 aaKnown RBP10.09□□□□□ -0.79
NEDD8-206ENST00000531430 ANKRD1Q15327 319 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 TAF12Q16514 161 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 ECM1Q16610 540 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 STXBP5Q5T5C0 1151 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 GPR158Q5T848 1215 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 TXNDC11Q6PKC3 985 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 ALKAL1Q6UXT8 129 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 TMEM130Q8N3G9 435 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 LEMD2Q8NC56 503 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 TTC16Q8NEE8 873 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 SMOC1Q9H4F8 434 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 DDX19AQ9NUU7 478 aaKnown RBP10.09□□□□□ -0.79
NEDD8-206ENST00000531430 ANKFY1Q9P2R3 1169 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 SLC8A2Q9UPR5 921 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 YIPF1Q9Y548 306 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 TICRRQ7Z2Z1 1910 aa10.09□□□□□ -0.79
NEDD8-206ENST00000531430 K7ESF4 209 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 SLC16A4O15374 487 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 FOXD2O60548 495 aaPredicted RBP10.08□□□□□ -0.8
NEDD8-206ENST00000531430 SOAT2O75908 522 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 MCF2P10911 925 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 KCNE1P15382 129 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 GABRR2P28476 465 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 NPTX2P47972 431 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 RAD51AP2Q09MP3 1159 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 STRN3Q13033 797 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 PLD1Q13393 1074 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 ME3Q16798 604 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 ARHGAP29Q52LW3 1261 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 ARHGAP15Q53QZ3 475 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 STPG1Q5TH74 334 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 ARMCX5Q6P1M9 558 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 C1orf228Q6PIY5 440 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 CACNA2D4Q7Z3S7 1137 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 DNAJB7Q7Z6W7 309 aaPredicted RBP10.08□□□□□ -0.8
NEDD8-206ENST00000531430 RALGPS2Q86X27 583 aaPredicted RBP10.08□□□□□ -0.8
NEDD8-206ENST00000531430 FAM212AQ96EL1 285 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 SUSD3Q96L08 255 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 TRPV4Q9HBA0 871 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 RXFP3Q9NSD7 469 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 THG1LQ9NWX6 298 aaKnown RBP10.08□□□□□ -0.8
NEDD8-206ENST00000531430 LRWD1Q9UFC0 647 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 TUBGCP4Q9UGJ1 667 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 PCDHB8Q9UN66 801 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 DNM3Q9UQ16 869 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 ATG2BQ96BY7 2078 aa10.08□□□□□ -0.8
NEDD8-206ENST00000531430 NCANO14594 1321 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 MYBPHLA2RUH7 354 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 E9PMD0 336 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 EXTL3O43909 919 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 HIP1RO75146 1068 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 RPP40O75818 363 aaKnown RBP10.07□□□□□ -0.8
NEDD8-206ENST00000531430 CTHP32929 405 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 TNK2Q07912 1038 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 DMP1Q13316 513 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-206ENST00000531430 SLC10A6Q3KNW5 377 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 XKR4Q5GH76 650 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 HAUS3Q68CZ6 603 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 MPZL3Q6UWV2 235 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 KBTBD6Q86V97 674 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 WDR5BQ86VZ2 330 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 ATAD1Q8NBU5 361 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 NSUN7Q8NE18 718 aaKnown RBP10.07□□□□□ -0.8
NEDD8-206ENST00000531430 SNX29Q8TEQ0 813 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 KIF12Q96FN5 646 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 MSANTD3Q96H12 275 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 LRRC3BQ96PB8 259 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 SMG9Q9H0W8 520 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms