RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 FAM186AA6NE01 2351 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 SHISA7A6NL88 538 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 OGTO15294 1046 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 NCAM2O15394 837 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 FAM189A1O60320 539 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 CD2BP2O95400 341 aaKnown RBP13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 VNN2O95498 520 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 PIGRP01833 764 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 ADRB2P07550 413 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 MYL4P12829 197 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 SCP2P22307 547 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 UBA7P41226 1012 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 RPS9P46781 194 aaKnown RBP13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 GUCY2FP51841 1108 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 FZD5Q13467 585 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 DHX8Q14562 1220 aaKnown RBP13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 ENOX2Q16206 610 aaKnown RBP13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 MYCT1Q8N699 235 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 SUMF1Q8NBK3 374 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 LEMD2Q8NC56 503 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 BEST2Q8NFU1 509 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 LRRC15Q8TF66 581 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 RUBCNQ92622 972 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 CALML4Q96GE6 196 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 TRMT61BQ9BVS5 477 aaKnown RBP13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 OXCT2Q9BYC2 517 aaPredicted RBP13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 BRD9Q9H8M2 597 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 ASAH2Q9NR71 780 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 BLOC1S4Q9NUP1 217 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 MRPS17Q9Y2R5 130 aaKnown RBP13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 YIPF1Q9Y548 306 aa13.93□□□□□ -0.18
TM9SF1-211ENST00000531406 A0A0B4J269 797 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 OR6C75A6NL08 312 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 HNRNPDLO14979 420 aaKnown RBP13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 XPOTO43592 962 aaKnown RBP13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 KINO60870 393 aaKnown RBP13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 FAM13AO94988 1023 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 OR4Q2P0C623 313 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 GJA1P17302 382 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 VIPR2P41587 438 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 ZNF131P52739 623 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 SPATA1Q5VX52 437 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 VITQ6UXI7 678 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 DSTYKQ6XUX3 929 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 ERMP1Q7Z2K6 904 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 USP37Q86T82 979 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 MAP4K3Q8IVH8 894 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 KIAA2013Q8IYS2 634 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 ZNF687Q8N1G0 1237 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 ZSCAN18Q8TBC5 510 aaPredicted RBP13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 BORCS6Q96GS4 357 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 TSPAN18Q96SJ8 248 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 RPF1Q9H9Y2 349 aaKnown RBP13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 TRPV4Q9HBA0 871 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 PARVGQ9HBI0 331 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 SMC3Q9UQE7 1217 aa13.92□□□□□ -0.18
TM9SF1-211ENST00000531406 K7ENM7 598 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 MAN2B1O00754 1011 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 PPEF2O14830 753 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 SPTLC1O15269 473 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 PSMC3P17980 439 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 PLCG1P19174 1290 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 GDI1P31150 447 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 DUSP4Q13115 394 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 GPR17Q13304 367 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 MCM6Q14566 821 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 TEAD2Q15562 447 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 LARP1BQ659C4 914 aaKnown RBP13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 JADE1Q6IE81 842 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 SLC39A4Q6P5W5 647 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 DCLK2Q8N568 766 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 SHKBP1Q8TBC3 707 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 RAD54LQ92698 747 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 IRF7Q92985 503 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 FAM212AQ96EL1 285 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 PGLYRP2Q96PD5 576 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 HINFPQ9BQA5 517 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 MSTO1Q9BUK6 570 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 LRRC3Q9BY71 257 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 CRISPLD1Q9H336 500 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 ZNF334Q9HCZ1 680 aaPredicted RBP13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 TRPV5Q9NQA5 729 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 CPSF3Q9UKF6 684 aaKnown RBP13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 PCDHGA2Q9Y5H1 932 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 NOTCH4Q99466 2003 aa13.91□□□□□ -0.18
TM9SF1-211ENST00000531406 EP300Q09472 2414 aaPredicted RBP13.9□□□□□ -0.18
TM9SF1-211ENST00000531406 TRAK2O60296 914 aa13.9□□□□□ -0.18
TM9SF1-211ENST00000531406 BMP15O95972 392 aa13.9□□□□□ -0.18
TM9SF1-211ENST00000531406 KRT18P05783 430 aaKnown RBP13.9□□□□□ -0.18
TM9SF1-211ENST00000531406 TYMPP19971 482 aa13.9□□□□□ -0.18
TM9SF1-211ENST00000531406 PAX3P23760 479 aa13.9□□□□□ -0.18
TM9SF1-211ENST00000531406 LONP1P36776 959 aaKnown RBP13.9□□□□□ -0.18
TM9SF1-211ENST00000531406 ALDH1A3P47895 512 aa13.9□□□□□ -0.18
TM9SF1-211ENST00000531406 EPHB3P54753 998 aa13.9□□□□□ -0.18
TM9SF1-211ENST00000531406 LILRA4P59901 499 aa13.9□□□□□ -0.18
TM9SF1-211ENST00000531406 GRIN1Q05586 938 aa13.9□□□□□ -0.18
TM9SF1-211ENST00000531406 MTAPQ13126 283 aa13.9□□□□□ -0.18
TM9SF1-211ENST00000531406 PLD1Q13393 1074 aa13.9□□□□□ -0.18
TM9SF1-211ENST00000531406 MYBPC2Q14324 1141 aa13.9□□□□□ -0.18
TM9SF1-211ENST00000531406 KARSQ15046 597 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms