RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 CYP4F11Q9HBI6 524 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 BRMS1Q9HCU9 246 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 CNTN3Q9P232 1028 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 LHX6Q9UPM6 363 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 PIAS3Q9Y6X2 628 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 PHLPP2Q6ZVD8 1323 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 HELZP42694 1942 aaKnown RBP10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 K7ESF4 209 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 HRO43593 1189 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 GDF9O60383 454 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 OR52Z1P0C646 297 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 PSMC3P17980 439 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 GDI1P31150 447 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 NPTX2P47972 431 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 SOX9P48436 509 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 EFNA5P52803 228 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 RING1Q06587 406 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 TEAD2Q15562 447 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 ZNF174Q15697 407 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 ZNF568Q3ZCX4 644 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 SEZ6Q53EL9 994 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 STXBP5Q5T5C0 1151 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 TXNDC11Q6PKC3 985 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 UNQ6494/PRO21346Q6UXR6 183 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 RNF19BQ6ZMZ0 732 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 PDZD4Q76G19 769 aaPredicted RBP10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 KCNK18Q7Z418 384 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 TMC8Q8IU68 726 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 SHKBP1Q8TBC3 707 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 ZSCAN18Q8TBC5 510 aaPredicted RBP10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 DDX1Q92499 740 aaKnown RBP10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 FAM3CQ92520 227 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 SMARCD2Q92925 531 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 ZBTB45Q96K62 511 aaPredicted RBP10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 GBP4Q96PP9 640 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 MKNK1Q9BUB5 465 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 HAPLN2Q9GZV7 340 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 DNAJC25Q9H1X3 360 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 LMAN1LQ9HAT1 526 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 TRPV4Q9HBA0 871 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 ZFP14Q9HCL3 533 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 TRPV5Q9NQA5 729 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 RBM12Q9NTZ6 932 aaKnown RBP10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 ARHGAP28Q9P2N2 729 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 TUBGCP4Q9UGJ1 667 aa10.07□□□□□ -0.8
CHMP4A-205ENST00000531158 PP2D1A8MPX8 630 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 E9PMD0 336 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 K7ERI5 159 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 SYN3O14994 580 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 NCAM2O15394 837 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 TRAPPC3O43617 180 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 OR4Q2P0C623 313 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 CCNE1P24864 410 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 FXR2P51116 673 aaKnown RBP eCLIP10.06□□□□□ -0.82e-8■■□□□ 13.1
CHMP4A-205ENST00000531158 PEX3P56589 373 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 ANAPC15P60006 121 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 TWF1Q12792 350 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 PPP2R5AQ15172 486 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 IL17AQ16552 155 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 SLC10A6Q3KNW5 377 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 CTXN3Q4LDR2 81 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 CLEC17AQ6ZS10 378 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 GPIHBP1Q8IV16 184 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 BEST2Q8NFU1 509 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 DDX12PQ92771 950 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 KIFAP3Q92845 792 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 IRF7Q92985 503 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 SUSD3Q96L08 255 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 RUSC1Q9BVN2 902 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 KIAA1024Q9UPX6 916 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 MRPS17Q9Y2R5 130 aaKnown RBP10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 YIPF1Q9Y548 306 aa10.06□□□□□ -0.8
CHMP4A-205ENST00000531158 TNRC6BQ9UPQ9 1833 aaKnown RBP10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 CHURC1-FNTBB4DL54 471 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 MAN2B1O00754 1011 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 HIP1RO75146 1068 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 MCF2P10911 925 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 MYL4P12829 197 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 CCT6AP40227 531 aaKnown RBP10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 FNTBP49356 437 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 TOB1P50616 345 aaPredicted RBP10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 CCR3P51677 355 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 SPAG1Q07617 926 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 FCHO2Q0JRZ9 810 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 PTGDRQ13258 359 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 ANKRD1Q15327 319 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 TPGS2Q68CL5 300 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 LAIR1Q6GTX8 287 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 MFSD6LQ8IWD5 586 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 TTC9BQ8N6N2 239 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 IGSF22Q8N9C0 903 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 KDF1Q8NAX2 398 aaPredicted RBP10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 CHFRQ96EP1 664 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 IFT74Q96LB3 600 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 PGLYRP2Q96PD5 576 aa10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 MMTAG2Q9BU76 263 aaKnown RBP10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 CCDC94Q9BW85 323 aaPredicted RBP10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 ASH1LQ9NR48 2969 aaKnown RBP10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 TOPORSQ9NS56 1045 aaPredicted RBP10.05□□□□□ -0.8
CHMP4A-205ENST00000531158 SEMA4GQ9NTN9 838 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms