RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 VNN1O95497 513 aa17.28■□□□□ 0.36
BRK1-201ENST00000530758 CTSAP10619 480 aa17.28■□□□□ 0.36
BRK1-201ENST00000530758 ZNF18P17022 549 aa17.28■□□□□ 0.36
BRK1-201ENST00000530758 POLR2BP30876 1174 aaKnown RBP17.28■□□□□ 0.36
BRK1-201ENST00000530758 GCLMP48507 274 aa17.28■□□□□ 0.36
BRK1-201ENST00000530758 TAF6P49848 677 aa17.28■□□□□ 0.36
BRK1-201ENST00000530758 ERVFC1P60507 584 aa17.28■□□□□ 0.36
BRK1-201ENST00000530758 USP41Q3LFD5 358 aa17.28■□□□□ 0.36
BRK1-201ENST00000530758 KIAA0319Q5VV43 1072 aa17.28■□□□□ 0.36
BRK1-201ENST00000530758 LIMS2Q7Z4I7 341 aa17.28■□□□□ 0.36
BRK1-201ENST00000530758 ZNF560Q96MR9 790 aa17.28■□□□□ 0.36
BRK1-201ENST00000530758 ZBP1Q9H171 429 aa17.28■□□□□ 0.36
BRK1-201ENST00000530758 XYLT2Q9H1B5 865 aa17.28■□□□□ 0.36
BRK1-201ENST00000530758 FANCLQ9NW38 375 aa17.28■□□□□ 0.36
BRK1-201ENST00000530758 NUB1Q9Y5A7 615 aa17.28■□□□□ 0.36
BRK1-201ENST00000530758 SPTBN5Q9NRC6 3674 aaKnown RBP17.27■□□□□ 0.36
BRK1-201ENST00000530758 KPNA7A9QM74 516 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 FAM163BP0C2L3 166 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 BRCC3P46736 316 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 FMO5P49326 533 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 DSG1Q02413 1049 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 KCNH2Q12809 1159 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 MRPL58Q14197 206 aaKnown RBP17.27■□□□□ 0.36
BRK1-201ENST00000530758 SGSM1Q2NKQ1 1148 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 SV2CQ496J9 727 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 TCP11X2Q5H9J9 407 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.27■□□□□ 0.36
BRK1-201ENST00000530758 TAS1R1Q7RTX1 841 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.27■□□□□ 0.36
BRK1-201ENST00000530758 VPS52Q8N1B4 723 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 GDPD5Q8WTR4 605 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 TAF4BQ92750 862 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 MRPL38Q96DV4 380 aaKnown RBP17.27■□□□□ 0.36
BRK1-201ENST00000530758 HPDLQ96IR7 371 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 FAXDC2Q96IV6 333 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 NGRNQ9NPE2 291 aaKnown RBP17.27■□□□□ 0.36
BRK1-201ENST00000530758 PRDM6Q9NQX0 595 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 TLR9Q9NR96 1032 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 PCDHB8Q9UN66 801 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 SSX2IPQ9Y2D8 614 aa17.27■□□□□ 0.36
BRK1-201ENST00000530758 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.27■□□□□ 0.36
BRK1-201ENST00000530758 CYP11A1P05108 521 aa17.26■□□□□ 0.35
BRK1-201ENST00000530758 KRT19P08727 400 aa17.26■□□□□ 0.35
BRK1-201ENST00000530758 MYO1EQ12965 1108 aa17.26■□□□□ 0.35
BRK1-201ENST00000530758 TRPC3Q13507 836 aa17.26■□□□□ 0.35
BRK1-201ENST00000530758 NCOA4Q13772 614 aa17.26■□□□□ 0.35
BRK1-201ENST00000530758 PTPROQ16827 1216 aa17.26■□□□□ 0.35
BRK1-201ENST00000530758 CBWD6Q4V339 395 aa17.26■□□□□ 0.35
BRK1-201ENST00000530758 DCAF17Q5H9S7 520 aaPredicted RBP17.26■□□□□ 0.35
BRK1-201ENST00000530758 CBWD3Q5JTY5 395 aa17.26■□□□□ 0.35
BRK1-201ENST00000530758 CBWD5Q5RIA9 395 aa17.26■□□□□ 0.35
BRK1-201ENST00000530758 FAM171A1Q5VUB5 890 aa17.26■□□□□ 0.35
BRK1-201ENST00000530758 TCERG1LQ5VWI1 586 aa17.26■□□□□ 0.35
BRK1-201ENST00000530758 DPH6Q7L8W6 267 aa17.26■□□□□ 0.35
BRK1-201ENST00000530758 MRPL43Q8N983 215 aaKnown RBP17.26■□□□□ 0.35
BRK1-201ENST00000530758 HASPINQ8TF76 798 aa17.26■□□□□ 0.35
BRK1-201ENST00000530758 SENP8Q96LD8 212 aa17.26■□□□□ 0.35
BRK1-201ENST00000530758 GAS2L1Q99501 681 aaPredicted RBP17.26■□□□□ 0.35
BRK1-201ENST00000530758 CUL9Q8IWT3 2517 aa17.26■□□□□ 0.35
BRK1-201ENST00000530758 VCANP13611 3396 aa17.26■□□□□ 0.35
BRK1-201ENST00000530758 PRRC2BQ5JSZ5 2229 aaKnown RBP17.25■□□□□ 0.35
BRK1-201ENST00000530758 ARHGEF37A1IGU5 675 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 KCNJ18B7U540 433 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 N4BP1O75113 896 aaKnown RBP17.25■□□□□ 0.35
BRK1-201ENST00000530758 PHACTR2O75167 634 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 OAZ2O95190 189 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 ASS1P00966 412 aaKnown RBP17.25■□□□□ 0.35
BRK1-201ENST00000530758 AFPP02771 609 aaKnown RBP17.25■□□□□ 0.35
BRK1-201ENST00000530758 TYMPP19971 482 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 MXI1P50539 228 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 MYL6P60660 151 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 BIRC3Q13489 604 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 KCNJ12Q14500 433 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 BMS1Q14692 1282 aaKnown RBP17.25■□□□□ 0.35
BRK1-201ENST00000530758 MAN2A1Q16706 1144 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 PDXDC1Q6P996 788 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 AOPEPQ8N6M6 819 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 FBXL13Q8NEE6 735 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 LNX1Q8TBB1 728 aaPredicted RBP17.25■□□□□ 0.35
BRK1-201ENST00000530758 SPATA18Q8TC71 538 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 FAM200AQ8TCP9 573 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 TAS1R2Q8TE23 839 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 PIK3R5Q8WYR1 880 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 TUBGCP2Q9BSJ2 902 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 TTPALQ9BTX7 342 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 RXFP1Q9HBX9 757 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 CBX8Q9HC52 389 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 RAB20Q9NX57 234 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 MAGEC2Q9UBF1 373 aaPredicted RBP17.25■□□□□ 0.35
BRK1-201ENST00000530758 LIMA1Q9UHB6 759 aaKnown RBP17.25■□□□□ 0.35
BRK1-201ENST00000530758 R3HCC1Q9Y3T6 440 aaKnown RBP17.25■□□□□ 0.35
BRK1-201ENST00000530758 MTCH2Q9Y6C9 303 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 TSC2P49815 1807 aa17.25■□□□□ 0.35
BRK1-201ENST00000530758 GTPBP10A4D1E9 387 aaKnown RBP17.24■□□□□ 0.35
BRK1-201ENST00000530758 TBC1D4O60343 1298 aa17.24■□□□□ 0.35
BRK1-201ENST00000530758 C1RP00736 705 aa17.24■□□□□ 0.35
BRK1-201ENST00000530758 HLA-DRAP01903 254 aa17.24■□□□□ 0.35
BRK1-201ENST00000530758 IRS1P35568 1242 aa17.24■□□□□ 0.35
BRK1-201ENST00000530758 GLUD2P49448 558 aa17.24■□□□□ 0.35
BRK1-201ENST00000530758 SMC1AQ14683 1233 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms