RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 SEPT5Q99719 369 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-227ENST00000530748 EPN3Q9H201 632 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 PAK5Q9P286 719 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 CDYLQ9Y232 598 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 NEU2Q9Y3R4 380 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 C17orf102A2RUQ5 167 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 SPDYE5A6NIY4 337 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 HBP1O60381 514 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 GFAPP14136 432 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 CHN1P15882 459 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 SESN2P58004 480 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-227ENST00000530748 CCZ1BP86790 482 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 CCZ1P86791 482 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-227ENST00000530748 ZNF200P98182 395 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-227ENST00000530748 SREBF2Q12772 1141 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 SPDYE7PQ495Y7 208 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 PATL1Q86TB9 770 aaKnown RBP8.89□□□□□ -0.99
CTNND1-227ENST00000530748 GPRC5AQ8NFJ5 357 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 PTPRN2Q92932 1015 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 PRMT7Q9NVM4 692 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-227ENST00000530748 CPS1P31327 1500 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 RNF103-CHMP3A0A140T963 221 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 MEFVO15553 781 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-227ENST00000530748 SPAG6O75602 509 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 CTSHP09668 335 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 HIST1H2AGP0C0S8 130 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-227ENST00000530748 HIST1H2ADP20671 130 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 PNPLA4P41247 253 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 UGP2Q16851 508 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 HIST1H2AHQ96KK5 128 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 HIST1H2AJQ99878 128 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 H2AFJQ9BTM1 129 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 CYP4F11Q9HBI6 524 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 AIPL1Q9NZN9 384 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 WARS2Q9UGM6 360 aaKnown RBP8.89□□□□□ -0.99
CTNND1-227ENST00000530748 ZC3H7BQ9UGR2 993 aaKnown RBP8.89□□□□□ -0.99
CTNND1-227ENST00000530748 TCP11X1B4DZS4 312 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 EFCAB14O75071 495 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 MDH1P40925 334 aaKnown RBP8.89□□□□□ -0.99
CTNND1-227ENST00000530748 SERPINB4P48594 390 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 VCPP55072 806 aaKnown RBP8.89□□□□□ -0.99
CTNND1-227ENST00000530748 ACTR2P61160 394 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 PDK1Q15118 436 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 ZC2HC1CQ53FD0 456 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-227ENST00000530748 IL31Q6EBC2 164 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 GRAMD4Q6IC98 578 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 NOTUMQ6P988 496 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 SNX31Q8N9S9 440 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 ZNF555Q8NEP9 628 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 WDR24Q96S15 920 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 MKNK1Q9BUB5 465 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 ERAP1Q9NZ08 941 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 PCDHGB4Q9UN71 923 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 ARHGAP26Q9UNA1 814 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 ARL2BPQ9Y2Y0 163 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 SUPT3HB4E1H0 165 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 SUPT3HO75486 399 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 ENO1P06733 434 aaKnown RBP8.89□□□□□ -0.99
CTNND1-227ENST00000530748 HMBSP08397 361 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 LONRF1Q17RB8 773 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 EFHC1Q5JVL4 640 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 SLC7A14Q8TBB6 771 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 CALML6Q8TD86 181 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 KCNF1Q9H3M0 494 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 RSAD1Q9HA92 442 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 CLCA2Q9UQC9 943 aa8.89□□□□□ -0.99
CTNND1-227ENST00000530748 MORC2Q9Y6X9 1032 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-227ENST00000530748 PDGFRBP09619 1106 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 LAMC2Q13753 1193 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 PKN3Q6P5Z2 889 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 FOXP3Q9BZS1 431 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 ETNK1Q9HBU6 452 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 TUBE1Q9UJT0 475 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 SH3BP1Q9Y3L3 701 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 SPATA31A5Q5VU36 1347 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 SPATA31A7Q8IWB4 1347 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 RARBP10826 455 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 ODC1P11926 461 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 PTK7Q13308 1070 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 BYSLQ13895 437 aaKnown RBP8.88□□□□□ -0.99
CTNND1-227ENST00000530748 ZC3H12BQ5HYM0 836 aaKnown RBP8.88□□□□□ -0.99
CTNND1-227ENST00000530748 SYCP2LQ5T4T6 812 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 LBHD1Q9BQE6 289 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-227ENST00000530748 FAM129AQ9BZQ8 928 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 GGA3Q9NZ52 723 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 SELENONQ9NZV5 590 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 NDUFS3O75489 264 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 ASMTLO95671 621 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 RAD23BP54727 409 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 USP10Q14694 798 aaKnown RBP8.88□□□□□ -0.99
CTNND1-227ENST00000530748 RIBC1Q8N443 379 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-227ENST00000530748 AGR3Q8TD06 166 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 PPP1R36Q96LQ0 422 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 RBM15Q96T37 977 aaKnown RBP eCLIP8.88□□□□□ -0.992e-7■■□□□ 13.5
CTNND1-227ENST00000530748 KIF2CQ99661 725 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 FRMD8P1Q9BZ68 369 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-227ENST00000530748 C20orf96Q9NUD7 363 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-227ENST00000530748 SLC4A7Q9Y6M7 1214 aa8.88□□□□□ -0.99
CTNND1-227ENST00000530748 GAS2O43903 313 aaKnown RBP8.88□□□□□ -0.99
CTNND1-227ENST00000530748 GTF2H1P32780 548 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms