RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 GCKP35557 465 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 RASSF2P50749 326 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 STYK1Q6J9G0 422 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 C3orf62Q6ZUJ4 267 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 LRRC37BQ96QE4 947 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 SENP7Q9BQF6 1050 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 LRRC4Q9HBW1 653 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 KCNN4O15554 427 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 BANF1O75531 89 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 ITGB3P05106 788 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 NCF2P19878 526 aaPredicted RBP13.05□□□□□ -0.32
SCN3B-206ENST00000530277 HSPA9P38646 679 aaKnown RBP13.05□□□□□ -0.32
SCN3B-206ENST00000530277 ARPP19P56211 112 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 CUL2Q13617 745 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 ZCWPW2Q504Y3 356 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 CEP128Q6ZU80 1094 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 SPATA18Q8TC71 538 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 CCDC124Q96CT7 223 aaKnown RBP13.05□□□□□ -0.32
SCN3B-206ENST00000530277 NCAPGQ9BPX3 1015 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 TRAIPQ9BWF2 469 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 SLC40A1Q9NP59 571 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 METTL5Q9NRN9 209 aaKnown RBP13.05□□□□□ -0.32
SCN3B-206ENST00000530277 HNRNPH3P31942 346 aaKnown RBP13.05□□□□□ -0.32
SCN3B-206ENST00000530277 PTENP60484 403 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 CYP24A1Q07973 514 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 DPY19L2Q6NUT2 758 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 SPATA21Q7Z572 469 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 PARP9Q8IXQ6 854 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 CAVIN3Q969G5 261 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 SLC10A4Q96EP9 437 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 FAM81BQ96LP2 452 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 CXorf56Q9H5V9 222 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 DDX20Q9UHI6 824 aaKnown RBP13.05□□□□□ -0.32
SCN3B-206ENST00000530277 FRMPD4Q14CM0 1322 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 MED7O43513 233 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 CALB1P05937 261 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 BACE1P56817 501 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 EFCAB12Q6NXP0 572 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 SEPT1Q8WYJ6 367 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 MKL1Q969V6 931 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 CEP41Q9BYV8 373 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 VPS11Q9H270 941 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 ACTR5Q9H9F9 607 aaPredicted RBP13.04□□□□□ -0.32
SCN3B-206ENST00000530277 CYP4F11Q9HBI6 524 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 KIAA1586Q9HCI6 787 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 GDF3Q9NR23 364 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 LRRC37A3O60309 1634 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 A8MXQ7 604 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 F8VP50 259 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 CHUKO15111 745 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 VTNP04004 478 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 RARBP10826 455 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 ESRRAP11474 423 aaPredicted RBP13.04□□□□□ -0.32
SCN3B-206ENST00000530277 CDC25CP30307 473 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 CACNB2Q08289 660 aaPredicted RBP13.04□□□□□ -0.32
SCN3B-206ENST00000530277 TAF11Q15544 211 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 PRELID2Q8N945 189 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 CEP120Q8N960 986 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 SREK1Q8WXA9 508 aaKnown RBP13.04□□□□□ -0.32
SCN3B-206ENST00000530277 PCDHB18PQ96TA0 734 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 SIK2Q9H0K1 926 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 COPEO14579 308 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 CFLARO15519 480 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 EGFRP00533 1210 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 RFX1P22670 979 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 HOXA7P31268 230 aaPredicted RBP13.04□□□□□ -0.32
SCN3B-206ENST00000530277 SDC4P31431 198 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 AARSP49588 968 aaKnown RBP eCLIP13.04□□□□□ -0.32
SCN3B-206ENST00000530277 EPHB1P54762 984 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 MOB2Q70IA6 237 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 ATP2A3Q93084 1043 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 CPB2Q96IY4 423 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 UBN1Q9NPG3 1134 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 COG5Q9UP83 839 aa13.04□□□□□ -0.32
SCN3B-206ENST00000530277 CDH16O75309 829 aa13.03□□□□□ -0.32
SCN3B-206ENST00000530277 TBXAS1P24557 533 aaPredicted RBP13.03□□□□□ -0.32
SCN3B-206ENST00000530277 ATXN3P54252 364 aaPredicted RBP13.03□□□□□ -0.32
SCN3B-206ENST00000530277 RWDD4Q6NW29 188 aaKnown RBP13.03□□□□□ -0.32
SCN3B-206ENST00000530277 TRPM8Q7Z2W7 1104 aa13.03□□□□□ -0.32
SCN3B-206ENST00000530277 FEZF2Q8TBJ5 459 aa13.03□□□□□ -0.32
SCN3B-206ENST00000530277 KCND2Q9NZV8 630 aa13.03□□□□□ -0.32
SCN3B-206ENST00000530277 VWA5AO00534 786 aa13.03□□□□□ -0.32
SCN3B-206ENST00000530277 AGTP01019 485 aa13.03□□□□□ -0.32
SCN3B-206ENST00000530277 OATP04181 439 aa13.03□□□□□ -0.32
SCN3B-206ENST00000530277 CXCL8P10145 99 aa13.03□□□□□ -0.32
SCN3B-206ENST00000530277 SERPINB6P35237 376 aa13.03□□□□□ -0.32
SCN3B-206ENST00000530277 ARL4AP40617 200 aa13.03□□□□□ -0.32
SCN3B-206ENST00000530277 RPL7AP62424 266 aaKnown RBP13.03□□□□□ -0.32
SCN3B-206ENST00000530277 KDSRQ06136 332 aa13.03□□□□□ -0.32
SCN3B-206ENST00000530277 LRRC36Q1X8D7 754 aa13.03□□□□□ -0.32
SCN3B-206ENST00000530277 CCDC14Q49A88 953 aa13.03□□□□□ -0.32
SCN3B-206ENST00000530277 TWF2Q6IBS0 349 aaKnown RBP13.03□□□□□ -0.32
SCN3B-206ENST00000530277 DEPDC1BQ8WUY9 529 aa13.03□□□□□ -0.32
SCN3B-206ENST00000530277 A1CFQ9NQ94 594 aaKnown RBP13.03□□□□□ -0.32
SCN3B-206ENST00000530277 EXTL3O43909 919 aa13.03□□□□□ -0.32
SCN3B-206ENST00000530277 IREB2P48200 963 aaKnown RBP13.03□□□□□ -0.32
SCN3B-206ENST00000530277 SARNPP82979 210 aaKnown RBP13.03□□□□□ -0.32
SCN3B-206ENST00000530277 SPDYE2Q495Y8 402 aa13.03□□□□□ -0.32
SCN3B-206ENST00000530277 COPS5Q92905 334 aa13.03□□□□□ -0.32
SCN3B-206ENST00000530277 DIAPH2O60879 1101 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms