RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 CRACR2AQ9BSW2 395 aa14.66□□□□□ -0.06
SMCO4-205ENST00000529714 PLVAPQ9BX97 442 aa14.66□□□□□ -0.06
SMCO4-205ENST00000529714 PBX4Q9BYU1 374 aa14.66□□□□□ -0.06
SMCO4-205ENST00000529714 TRIM5Q9C035 493 aa14.66□□□□□ -0.06
SMCO4-205ENST00000529714 FAM124BQ9H5Z6 455 aaPredicted RBP14.66□□□□□ -0.06
SMCO4-205ENST00000529714 GRPEL1Q9HAV7 217 aa14.66□□□□□ -0.06
SMCO4-205ENST00000529714 MARCH5Q9NX47 278 aa14.66□□□□□ -0.06
SMCO4-205ENST00000529714 SPG21Q9NZD8 308 aa14.66□□□□□ -0.06
SMCO4-205ENST00000529714 CACNG4Q9UBN1 327 aa14.66□□□□□ -0.06
SMCO4-205ENST00000529714 ADAM28Q9UKQ2 775 aa14.66□□□□□ -0.06
SMCO4-205ENST00000529714 SIK3Q9Y2K2 1263 aa14.66□□□□□ -0.06
SMCO4-205ENST00000529714 PRG3Q9Y2Y8 225 aaPredicted RBP14.66□□□□□ -0.06
SMCO4-205ENST00000529714 NUB1Q9Y5A7 615 aa14.66□□□□□ -0.06
SMCO4-205ENST00000529714 SF3B1O75533 1304 aaKnown RBP eCLIP14.66□□□□□ -0.06
SMCO4-205ENST00000529714 C5orf67F2Z3F1 127 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 M0QZQ0 153 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 SPTLC1O15269 473 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 AP5Z1O43299 807 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 TADA2AO75478 443 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 EFEMP2O95967 443 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 RB1P06400 928 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 CA3P07451 260 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 FAM163BP0C2L3 166 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 SLC9A1P19634 815 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 RFX1P22670 979 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 BMPR1AP36894 532 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 PBX1P40424 430 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 PLCB2Q00722 1185 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 WDR72Q3MJ13 1102 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 LRIT3Q3SXY7 679 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 SCARA3Q6AZY7 606 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 DPH6Q7L8W6 267 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 SPATA18Q8TC71 538 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 JAKMIP2Q96AA8 810 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 TMEM169Q96HH4 297 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 MRFAP1L1Q96HT8 127 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 PI4K2AQ9BTU6 479 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 NIF3L1Q9GZT8 377 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 APEX2Q9UBZ4 518 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 FBXL5Q9UKA1 691 aa14.65□□□□□ -0.06
SMCO4-205ENST00000529714 YBX2Q9Y2T7 364 aaKnown RBP14.65□□□□□ -0.06
SMCO4-205ENST00000529714 ITGB1P05556 798 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 MYOGP15173 224 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 TBXAS1P24557 533 aaPredicted RBP14.64□□□□□ -0.07
SMCO4-205ENST00000529714 PBX2P40425 430 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 PBX3P40426 434 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 MRE11P49959 708 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 ERVK-21P61565 698 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 TNNC1P63316 161 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 PLCB3Q01970 1234 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 GCNT1Q02742 428 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 TAP1Q03518 808 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 TIGD5Q53EQ6 642 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 DPY19L2P1Q6NXN4 242 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 FUT10Q6P4F1 479 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 ENOSF1Q7L5Y1 443 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 LIMS2Q7Z4I7 341 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 TMEM173Q86WV6 379 aaPredicted RBP14.64□□□□□ -0.07
SMCO4-205ENST00000529714 RNF168Q8IYW5 571 aaPredicted RBP14.64□□□□□ -0.07
SMCO4-205ENST00000529714 TOP6BLQ8N6T0 577 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 RABGGTAQ92696 567 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 IQCDQ96DY2 449 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 SENP8Q96LD8 212 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 TGS1Q96RS0 853 aaKnown RBP14.64□□□□□ -0.07
SMCO4-205ENST00000529714 BCO2Q9BYV7 579 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 CYP3A43Q9HB55 503 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 APOBEC3GQ9HC16 384 aaKnown RBP14.64□□□□□ -0.07
SMCO4-205ENST00000529714 SIX2Q9NPC8 291 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 DSEQ9UL01 958 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 SNX9Q9Y5X1 595 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 ITIH6Q6UXX5 1313 aa14.64□□□□□ -0.07
SMCO4-205ENST00000529714 NT5C1B-RDH14C9J2C7 533 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 F8W810 466 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 SYN3O14994 580 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 HUS1O60921 280 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 LRRN2O75325 713 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 CYP11A1P05108 521 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 ODC1P11926 461 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 TYMPP19971 482 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 IGFBP6P24592 240 aaPredicted RBP14.63□□□□□ -0.07
SMCO4-205ENST00000529714 DNAJB2P25686 324 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 CTNNB1P35222 781 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 ASPAP45381 313 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 ZNF75DP51815 510 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 KRT17Q04695 432 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 FIGNQ5HY92 759 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 KLHDC7AQ5VTJ3 777 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 SPOPLQ6IQ16 392 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 PHLDB3Q6NSJ2 640 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 DSTYKQ6XUX3 929 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 DDX53Q86TM3 631 aaKnown RBP14.63□□□□□ -0.07
SMCO4-205ENST00000529714 GPR65Q8IYL9 337 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 TMEM86AQ8N2M4 240 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 TTC39CQ8N584 583 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 NEK11Q8NG66 645 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 HASPINQ8TF76 798 aa14.63□□□□□ -0.07
SMCO4-205ENST00000529714 BCL7CQ8WUZ0 217 aaPredicted RBP14.63□□□□□ -0.07
SMCO4-205ENST00000529714 PCMTD1Q96MG8 357 aaPredicted RBP14.63□□□□□ -0.07
SMCO4-205ENST00000529714 LSM14BQ9BX40 385 aaKnown RBP14.63□□□□□ -0.07
SMCO4-205ENST00000529714 NXF1Q9UBU9 619 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms