RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 CPB2Q96IY4 423 aa15.62■□□□□ 0.09
NR1H3-231ENST00000529540 CDT1Q9H211 546 aa15.62■□□□□ 0.09
NR1H3-231ENST00000529540 PCIF1Q9H4Z3 704 aa15.62■□□□□ 0.09
NR1H3-231ENST00000529540 GGA2Q9UJY4 613 aa15.62■□□□□ 0.09
NR1H3-231ENST00000529540 TISP43B9A030 160 aa15.61■□□□□ 0.09
NR1H3-231ENST00000529540 ABLIM1O14639 778 aa15.61■□□□□ 0.09
NR1H3-231ENST00000529540 AKAP3O75969 853 aa15.61■□□□□ 0.09
NR1H3-231ENST00000529540 SERPING1P05155 500 aa15.61■□□□□ 0.09
NR1H3-231ENST00000529540 CLTAP09496 248 aa15.61■□□□□ 0.09
NR1H3-231ENST00000529540 FGFR4P22455 802 aa15.61■□□□□ 0.09
NR1H3-231ENST00000529540 CD52P31358 61 aa15.61■□□□□ 0.09
NR1H3-231ENST00000529540 NAB2Q15742 525 aa15.61■□□□□ 0.09
NR1H3-231ENST00000529540 COL13A1Q5TAT6 717 aaPredicted RBP15.61■□□□□ 0.09
NR1H3-231ENST00000529540 CNPY4Q8N129 248 aa15.61■□□□□ 0.09
NR1H3-231ENST00000529540 SEPT8Q92599 483 aa15.61■□□□□ 0.09
NR1H3-231ENST00000529540 SMARCAL1Q9NZC9 954 aa15.61■□□□□ 0.09
NR1H3-231ENST00000529540 TANC1Q9C0D5 1861 aa15.61■□□□□ 0.09
NR1H3-231ENST00000529540 TTLL13PA6NNM8 815 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 BTNL10A8MVZ5 291 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 TIMP1P01033 207 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 PFKMP08237 780 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 RAG1P15918 1043 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 USP8P40818 1118 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 GRM5P41594 1212 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 YTHDF3Q7Z739 585 aaKnown RBP15.6■□□□□ 0.09
NR1H3-231ENST00000529540 ZBTB33Q86T24 672 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 EEF2KMTQ96G04 330 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 ZBTB45Q96K62 511 aaPredicted RBP15.6■□□□□ 0.09
NR1H3-231ENST00000529540 TSPAN18Q96SJ8 248 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 FAM213AQ9BRX8 229 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 IKZF4Q9H2S9 585 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 AGO3Q9H9G7 860 aaKnown RBP15.6■□□□□ 0.09
NR1H3-231ENST00000529540 TOPORSQ9NS56 1045 aaPredicted RBP15.6■□□□□ 0.09
NR1H3-231ENST00000529540 C1orf112Q9NSG2 853 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 EHD2Q9NZN4 543 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 PCDHGC5Q9Y5F6 944 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.6■□□□□ 0.09
NR1H3-231ENST00000529540 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.6■□□□□ 0.09
NR1H3-231ENST00000529540 HEXIM1O94992 359 aaKnown RBP15.6■□□□□ 0.09
NR1H3-231ENST00000529540 FSBPO95073 299 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 IL18RAPO95256 599 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 CXCL10P02778 98 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 HARSP12081 509 aaKnown RBP15.6■□□□□ 0.09
NR1H3-231ENST00000529540 CXCR5P32302 372 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 HSPA9P38646 679 aaKnown RBP15.6■□□□□ 0.09
NR1H3-231ENST00000529540 LIG3P49916 1009 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 YARSP54577 528 aaKnown RBP15.6■□□□□ 0.09
NR1H3-231ENST00000529540 GFPT1Q06210 699 aaPredicted RBP15.6■□□□□ 0.09
NR1H3-231ENST00000529540 KCNMA1Q12791 1236 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 BFSP1Q12934 665 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 PLEKHG4Q58EX7 1191 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 MEI1Q5TIA1 1274 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 SFMBT2Q5VUG0 894 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 EEF1DP3Q658K8 133 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 LRIG3Q6UXM1 1119 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 MICALCLQ6ZW33 695 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 CACNA2D4Q7Z3S7 1137 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 TMEM199Q8N511 208 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 TMC2Q8TDI7 906 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 PIK3R5Q8WYR1 880 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 SAAL1Q96ER3 474 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 MFSD14AQ96MC6 490 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 ACAP3Q96P50 834 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 FNBP1Q96RU3 617 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 PPP1R12CQ9BZL4 782 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 EPN3Q9H201 632 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 RPF1Q9H9Y2 349 aaKnown RBP15.6■□□□□ 0.09
NR1H3-231ENST00000529540 PLEKHA5Q9HAU0 1116 aa15.6■□□□□ 0.09
NR1H3-231ENST00000529540 RBAKQ9NYW8 714 aaPredicted RBP15.6■□□□□ 0.09
NR1H3-231ENST00000529540 CPSF3Q9UKF6 684 aaKnown RBP15.6■□□□□ 0.09
NR1H3-231ENST00000529540 HMGB1P1B2RPK0 211 aaPredicted RBP15.59■□□□□ 0.09
NR1H3-231ENST00000529540 NDUFAB1O14561 156 aa15.59■□□□□ 0.09
NR1H3-231ENST00000529540 NPTXRO95502 500 aa15.59■□□□□ 0.09
NR1H3-231ENST00000529540 GLI1P08151 1106 aa15.59■□□□□ 0.09
NR1H3-231ENST00000529540 CARSP49589 748 aaKnown RBP15.59■□□□□ 0.09
NR1H3-231ENST00000529540 CASP4P49662 377 aa15.59■□□□□ 0.09
NR1H3-231ENST00000529540 AP3M2P53677 418 aa15.59■□□□□ 0.09
NR1H3-231ENST00000529540 MCCD1P59942 119 aaPredicted RBP15.59■□□□□ 0.09
NR1H3-231ENST00000529540 PDCLQ13371 301 aa15.59■□□□□ 0.09
NR1H3-231ENST00000529540 MBTPS1Q14703 1052 aa15.59■□□□□ 0.09
NR1H3-231ENST00000529540 BRSK2Q8IWQ3 736 aa15.59■□□□□ 0.09
NR1H3-231ENST00000529540 TRIM59Q8IWR1 403 aa15.59■□□□□ 0.09
NR1H3-231ENST00000529540 THNSL1Q8IYQ7 743 aa15.59■□□□□ 0.09
NR1H3-231ENST00000529540 RPUSD2Q8IZ73 545 aaKnown RBP15.59■□□□□ 0.09
NR1H3-231ENST00000529540 RSPH1Q8WYR4 309 aa15.59■□□□□ 0.09
NR1H3-231ENST00000529540 PRDM5Q9NQX1 630 aaPredicted RBP15.59■□□□□ 0.09
NR1H3-231ENST00000529540 FAM105AQ9NUU6 356 aa15.59■□□□□ 0.09
NR1H3-231ENST00000529540 USP20Q9Y2K6 914 aa15.59■□□□□ 0.09
NR1H3-231ENST00000529540 ATP8B3O60423 1300 aa15.59■□□□□ 0.09
NR1H3-231ENST00000529540 BHMG1C9JSJ3 638 aaPredicted RBP15.58■□□□□ 0.08
NR1H3-231ENST00000529540 FAM189A1O60320 539 aa15.58■□□□□ 0.08
NR1H3-231ENST00000529540 NBNO60934 754 aa15.58■□□□□ 0.08
NR1H3-231ENST00000529540 ZNF623O75123 536 aa15.58■□□□□ 0.08
NR1H3-231ENST00000529540 ACOT2P49753 483 aa15.58■□□□□ 0.08
NR1H3-231ENST00000529540 VAMP7P51809 220 aa15.58■□□□□ 0.08
NR1H3-231ENST00000529540 TNNC1P63316 161 aa15.58■□□□□ 0.08
NR1H3-231ENST00000529540 CYP24A1Q07973 514 aa15.58■□□□□ 0.08
NR1H3-231ENST00000529540 CETN1Q12798 172 aa15.58■□□□□ 0.08
NR1H3-231ENST00000529540 PSMD6Q15008 389 aa15.58■□□□□ 0.08
NR1H3-231ENST00000529540 MFSD5Q6N075 450 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms