RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 OR7D4Q8NG98 312 aa6.12□□□□□ -1.43
CSDE1-212ENST00000529046 CACTINQ8WUQ7 758 aaKnown RBP6.12□□□□□ -1.43
CSDE1-212ENST00000529046 JPH3Q8WXH2 748 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-212ENST00000529046 ADI1Q9BV57 179 aa6.12□□□□□ -1.43
CSDE1-212ENST00000529046 IP6K2Q9UHH9 426 aa6.12□□□□□ -1.43
CSDE1-212ENST00000529046 NRAPQ86VF7 1730 aa6.11□□□□□ -1.43
CSDE1-212ENST00000529046 PARD3Q8TEW0 1356 aa6.11□□□□□ -1.43
CSDE1-212ENST00000529046 ACEP12821 1306 aa6.11□□□□□ -1.43
CSDE1-212ENST00000529046 SGTAO43765 313 aa6.11□□□□□ -1.43
CSDE1-212ENST00000529046 PRAMEF4O60810 478 aa6.11□□□□□ -1.43
CSDE1-212ENST00000529046 ITGA10O75578 1167 aa6.11□□□□□ -1.43
CSDE1-212ENST00000529046 ENDOD1O94919 500 aa6.11□□□□□ -1.43
CSDE1-212ENST00000529046 HMGB1P09429 215 aaKnown RBP6.11□□□□□ -1.43
CSDE1-212ENST00000529046 PF4V1P10720 104 aa6.11□□□□□ -1.43
CSDE1-212ENST00000529046 NPEPPSP55786 919 aa6.11□□□□□ -1.43
CSDE1-212ENST00000529046 ATP8B2P98198 1209 aa6.11□□□□□ -1.43
CSDE1-212ENST00000529046 RRP1BQ14684 758 aaKnown RBP6.11□□□□□ -1.43
CSDE1-212ENST00000529046 PPP2R5AQ15172 486 aa6.11□□□□□ -1.43
CSDE1-212ENST00000529046 MFSD5Q6N075 450 aa6.11□□□□□ -1.43
CSDE1-212ENST00000529046 TMPRSS6Q8IU80 811 aa6.11□□□□□ -1.43
CSDE1-212ENST00000529046 PCED1AQ9H1Q7 454 aa6.11□□□□□ -1.43
CSDE1-212ENST00000529046 ZNF703Q9H7S9 590 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-212ENST00000529046 PRDM11Q9NQV5 511 aa6.11□□□□□ -1.43
CSDE1-212ENST00000529046 G3BP2Q9UN86 482 aaKnown RBP6.11□□□□□ -1.43
CSDE1-212ENST00000529046 ITSN1Q15811 1721 aa6.11□□□□□ -1.43
CSDE1-212ENST00000529046 ARHGEF28Q8N1W1 1705 aaKnown RBP6.11□□□□□ -1.43
CSDE1-212ENST00000529046 CRYBG1Q9Y4K1 1723 aa6.11□□□□□ -1.43
CSDE1-212ENST00000529046 KIAA0232Q92628 1395 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 CENPJQ9HC77 1338 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-212ENST00000529046 AKR1B10O60218 316 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 GCP02774 474 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 LPOP22079 712 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-212ENST00000529046 ECHS1P30084 290 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 MAN2A2P49641 1150 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 HMGA2P52926 109 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 KIF23Q02241 960 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-212ENST00000529046 DUSP2Q05923 314 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 ABHD18Q0P651 414 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 KLF10Q13118 480 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 MRPL49Q13405 166 aaKnown RBP6.1□□□□□ -1.43
CSDE1-212ENST00000529046 TUBA3CQ13748 450 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 GTF2H3Q13889 308 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 CNGB1Q14028 1251 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-212ENST00000529046 C3orf36Q3SXR2 165 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 ATAT1Q5SQI0 421 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 TUBA3EQ6PEY2 450 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 B3GNT9Q6UX72 402 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 Q6ZRM9 215 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 ZNF572Q7Z3I7 529 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-212ENST00000529046 DEFB132Q7Z7B7 95 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 GSPT2Q8IYD1 628 aaKnown RBP6.1□□□□□ -1.43
CSDE1-212ENST00000529046 TRMT2AQ8IZ69 625 aaKnown RBP6.1□□□□□ -1.43
CSDE1-212ENST00000529046 PPM1NQ8N819 430 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 CASKIN2Q8WXE0 1202 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 CYFIP2Q96F07 1278 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 MRIQ9BWK5 157 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 PARPBPQ9NWS1 579 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 CEP72Q9P209 647 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 SAP30BPQ9UHR5 308 aaKnown RBP6.1□□□□□ -1.43
CSDE1-212ENST00000529046 BRWD3Q6RI45 1802 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 THSD7AQ9UPZ6 1657 aa6.1□□□□□ -1.43
CSDE1-212ENST00000529046 CCDC154A6NI56 674 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 WNT10BO00744 389 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 NARSO43776 548 aaKnown RBP6.09□□□□□ -1.43
CSDE1-212ENST00000529046 ALOX15P16050 662 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-212ENST00000529046 CYP2C19P33261 490 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 MCM7P33993 719 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 FXR1P51114 621 aaKnown RBP eCLIP6.09□□□□□ -1.43
CSDE1-212ENST00000529046 SCNN1GP51170 649 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 IGFL4Q6B9Z1 124 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 USP45Q70EL2 814 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 EPM2AIP1Q7L775 607 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-212ENST00000529046 GPRIN1Q7Z2K8 1008 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 CHPFQ8IZ52 775 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 MIER2Q8N344 545 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 MAGEB6Q8N7X4 407 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 NSUN6Q8TEA1 469 aaKnown RBP6.09□□□□□ -1.43
CSDE1-212ENST00000529046 HDAC10Q969S8 669 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 ZNF512Q96ME7 567 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-212ENST00000529046 PDCD2LQ9BRP1 358 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 GPR87Q9BY21 358 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 KCNH6Q9H252 994 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 FAM30AQ9NZY2 134 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 TCEAL9Q9UHQ7 104 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 ZBTB21Q9ULJ3 1066 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 CFAP20Q9Y6A4 193 aaKnown RBP6.09□□□□□ -1.43
CSDE1-212ENST00000529046 TOPAZ1Q8N9V7 1692 aa6.09□□□□□ -1.43
CSDE1-212ENST00000529046 SSH2Q76I76 1423 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 AATKQ6ZMQ8 1374 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 EVC2Q86UK5 1308 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 LRP5O75197 1615 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 ADCY6O43306 1168 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 PRPF3O43395 683 aaKnown RBP6.08□□□□□ -1.44
CSDE1-212ENST00000529046 MFAP3LO75121 409 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 IPO13O94829 963 aaKnown RBP6.08□□□□□ -1.44
CSDE1-212ENST00000529046 IL33O95760 270 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 AMY1AP04745 511 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 U2AF1L5P0DN76 240 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-212ENST00000529046 PDCP20941 246 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 CASRP41180 1078 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms