RNA–Protein interactions for RNA: ENST00000528906.5

PSMD13-208, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 858 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-208	ENST00000528906	DPH6	Q7L8W6	267 aa		14.01	□□□□□ -0.17
PSMD13-208	ENST00000528906	TMTC1	Q8IUR5	882 aa		14.01	□□□□□ -0.17
PSMD13-208	ENST00000528906	SHC3	Q92529	594 aa		14.01	□□□□□ -0.17
PSMD13-208	ENST00000528906	TRIM44	Q96DX7	344 aa	Predicted RBP	14.01	□□□□□ -0.17
PSMD13-208	ENST00000528906	KREMEN1	Q96MU8	473 aa		14.01	□□□□□ -0.17
PSMD13-208	ENST00000528906	DNAI2	Q9GZS0	605 aa		14.01	□□□□□ -0.17
PSMD13-208	ENST00000528906	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
PSMD13-208	ENST00000528906	TBC1D13	Q9NVG8	400 aa		14.01	□□□□□ -0.17
PSMD13-208	ENST00000528906	GDAP2	Q9NXN4	497 aa		14.01	□□□□□ -0.17
PSMD13-208	ENST00000528906	NXF1	Q9UBU9	619 aa	Known RBP	14.01	□□□□□ -0.17
PSMD13-208	ENST00000528906	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	14.01	□□□□□ -0.17
PSMD13-208	ENST00000528906	BRCA2	P51587	3418 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	TBKBP1	A7MCY6	615 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	KPNA7	A9QM74	516 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	FOXN3	O00409	490 aa	Predicted RBP	14	□□□□□ -0.17
PSMD13-208	ENST00000528906	DGKI	O75912	1065 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	UPP2	O95045	317 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	ALDH2	P05091	517 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	BPIFB4	P59827	614 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	LILRA4	P59901	499 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	ASIC2	Q16515	512 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	MEA1	Q16626	185 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	UPP1	Q16831	310 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	TMEM240	Q5SV17	173 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	OTOP2	Q7RTS6	562 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	FAM71A	Q8IYT1	594 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	LRRC43	Q8N309	656 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	PHOSPHO2	Q8TCD6	241 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	HERVK_113	Q902F9	699 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	BAG1	Q99933	345 aa	Predicted RBP	14	□□□□□ -0.17
PSMD13-208	ENST00000528906	TMEM175	Q9BSA9	504 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	BCO2	Q9BYV7	579 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	GOLGA2P5	Q9HBQ8	144 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	DNAH12	Q6ZR08	3092 aa		14	□□□□□ -0.17
PSMD13-208	ENST00000528906	CASTOR2	A6NHX0	329 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	ZBBX	A8MT70	800 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	TMEM189-UBE2V1	I3L0A0	370 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	RBAK-RBAKDN	I3L0D1	243 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	HUS1	O60921	280 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	B3GAT3	O94766	335 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	SERPING1	P05155	500 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	SYN1	P17600	705 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	FECH	P22830	423 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	ASPA	P45381	313 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	CLCNKB	P51801	687 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	GOLGA8F	Q08AF8	430 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	GOLGA8DP	Q0D2H9	430 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	SCARA3	Q6AZY7	606 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	CYP26C1	Q6V0L0	522 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	COLGALT2	Q8IYK4	626 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	TOP6BL	Q8N6T0	577 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	KAT5	Q92993	513 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	MMS19	Q96T76	1030 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	COLEC11	Q9BWP8	271 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	CNTN6	Q9UQ52	1028 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	SNX9	Q9Y5X1	595 aa		13.99	□□□□□ -0.17
PSMD13-208	ENST00000528906	PPEF2	O14830	753 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	TRAPPC3	O43617	180 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	TACC1	O75410	805 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	DDHD2	O94830	711 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	WEE2	P0C1S8	567 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	KRT5	P13647	590 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	ACO1	P21399	889 aa	Known RBP	13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	ANXA13	P27216	316 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	USP8	P40818	1118 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	PRKCI	P41743	596 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	AARS	P49588	968 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	KLHL30	Q0D2K2	578 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	IRF2BP2	Q7Z5L9	587 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	ZNF280B	Q86YH2	543 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	CMTR2	Q8IYT2	770 aa	Known RBP	13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	APPL2	Q8NEU8	664 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	SPATA18	Q8TC71	538 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	ZNF689	Q96CS4	500 aa	Predicted RBP	13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	SLC9A7	Q96T83	725 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.98	□□□□□ -0.17	5e-7	■■■□□ 18.9
PSMD13-208	ENST00000528906	GPR88	Q9GZN0	384 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	NRDE2	Q9H7Z3	1164 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	CISH	Q9NSE2	258 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	POLI	Q9UNA4	740 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	PCDHB4	Q9Y5E5	795 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	SLC4A7	Q9Y6M7	1214 aa		13.98	□□□□□ -0.17
PSMD13-208	ENST00000528906	SSU72P8	A0A1W2PR75	194 aa		13.97	□□□□□ -0.17
PSMD13-208	ENST00000528906	CYB561D2	O14569	222 aa		13.97	□□□□□ -0.17
PSMD13-208	ENST00000528906	SPTLC1	O15269	473 aa		13.97	□□□□□ -0.17
PSMD13-208	ENST00000528906	ARHGAP6	O43182	974 aa		13.97	□□□□□ -0.17
PSMD13-208	ENST00000528906	GFPT2	O94808	682 aa		13.97	□□□□□ -0.17
PSMD13-208	ENST00000528906	SKIL	P12757	684 aa		13.97	□□□□□ -0.17
PSMD13-208	ENST00000528906	OR1G1	P47890	313 aa		13.97	□□□□□ -0.17
PSMD13-208	ENST00000528906	GATM	P50440	423 aa		13.97	□□□□□ -0.17
PSMD13-208	ENST00000528906	EPHB4	P54760	987 aa		13.97	□□□□□ -0.17
PSMD13-208	ENST00000528906	DEFB103A	P81534	67 aa		13.97	□□□□□ -0.17
PSMD13-208	ENST00000528906	PTK2	Q05397	1052 aa		13.97	□□□□□ -0.17
PSMD13-208	ENST00000528906	WDR59	Q6PJI9	974 aa		13.97	□□□□□ -0.17
PSMD13-208	ENST00000528906	DSTYK	Q6XUX3	929 aa		13.97	□□□□□ -0.17
PSMD13-208	ENST00000528906	LIMS2	Q7Z4I7	341 aa		13.97	□□□□□ -0.17
PSMD13-208	ENST00000528906	VPS36	Q86VN1	386 aa		13.97	□□□□□ -0.17
PSMD13-208	ENST00000528906	UNC93A	Q86WB7	457 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms