RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 CGNQ9P2M7 1197 aaKnown RBP11.94□□□□□ -0.5
CCDC84-205ENST00000528088 CPSF3Q9UKF6 684 aaKnown RBP11.94□□□□□ -0.5
CCDC84-205ENST00000528088 DOLKQ9UPQ8 538 aa11.94□□□□□ -0.5
CCDC84-205ENST00000528088 FAN1Q9Y2M0 1017 aa11.94□□□□□ -0.5
CCDC84-205ENST00000528088 STYXL1Q9Y6J8 313 aa11.94□□□□□ -0.5
CCDC84-205ENST00000528088 ATG2AQ2TAZ0 1938 aa11.94□□□□□ -0.5
CCDC84-205ENST00000528088 SMIM28A0A1B0GU29 152 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 ZNF233A6NK53 670 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 LACTBL1A8MY62 500 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 PDXKO00764 312 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 PTGESO14684 152 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 PSMA7O14818 248 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 TGFB1I1O43294 461 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 XPOTO43592 962 aaKnown RBP11.93□□□□□ -0.5
CCDC84-205ENST00000528088 DDHD2O94830 711 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 PRCPP42785 496 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 SLC11A1P49279 550 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 KRT17Q04695 432 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 TUSC3Q13454 348 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 ENOX2Q16206 610 aaKnown RBP11.93□□□□□ -0.5
CCDC84-205ENST00000528088 SLC10A6Q3KNW5 377 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 SPATA20Q8TB22 786 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 RABGGTAQ92696 567 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 SYAP1Q96A49 352 aaPredicted RBP11.93□□□□□ -0.5
CCDC84-205ENST00000528088 PABPC5Q96DU9 382 aaKnown RBP11.93□□□□□ -0.5
CCDC84-205ENST00000528088 TMEM175Q9BSA9 504 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 CXCL16Q9H2A7 254 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 PLEKHA5Q9HAU0 1116 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 KIAA1586Q9HCI6 787 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 CLDND1Q9NY35 253 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 SPG21Q9NZD8 308 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 CNTN3Q9P232 1028 aa11.93□□□□□ -0.5
CCDC84-205ENST00000528088 PUF60Q9UHX1 559 aaKnown RBP11.93□□□□□ -0.5
CCDC84-205ENST00000528088 BDP1A6H8Y1 2624 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 FGF18O76093 207 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 CLSTN1O94985 981 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 IL18RAPO95256 599 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 NR3C1P04150 777 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 RPL13P26373 211 aaKnown RBP11.92□□□□□ -0.5
CCDC84-205ENST00000528088 PPP1R2P41236 205 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 TMEM132DQ14C87 1099 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 CLUL1Q15846 466 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 SNRNP35Q16560 246 aaKnown RBP11.92□□□□□ -0.5
CCDC84-205ENST00000528088 CTC1Q2NKJ3 1217 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 OXLD1Q5BKU9 147 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 CCDC183Q5T5S1 534 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 JADE1Q6IE81 842 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 CD302Q8IX05 232 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 COLGALT2Q8IYK4 626 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 TRIML1Q8N9V2 468 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 ZSWIM2Q8NEG5 633 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 MICAL1Q8TDZ2 1067 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 HASPINQ8TF76 798 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 COLEC11Q9BWP8 271 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 KCTD10Q9H3F6 313 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 IL21Q9HBE4 155 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 GOLGA2P5Q9HBQ8 144 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 CACNG4Q9UBN1 327 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 CTNND2Q9UQB3 1225 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 FRMD4BQ9Y2L6 1034 aa11.92□□□□□ -0.5
CCDC84-205ENST00000528088 R3HCC1Q9Y3T6 440 aaKnown RBP11.92□□□□□ -0.5
CCDC84-205ENST00000528088 TTC26A0AVF1 554 aa11.91□□□□□ -0.5
CCDC84-205ENST00000528088 NRP1O14786 923 aa11.91□□□□□ -0.5
CCDC84-205ENST00000528088 INPPL1O15357 1258 aa11.91□□□□□ -0.5
CCDC84-205ENST00000528088 FAM189A1O60320 539 aa11.91□□□□□ -0.5
CCDC84-205ENST00000528088 TADA2AO75478 443 aa11.91□□□□□ -0.5
CCDC84-205ENST00000528088 GALTP07902 379 aa11.91□□□□□ -0.5
CCDC84-205ENST00000528088 DLATP10515 647 aaKnown RBP11.91□□□□□ -0.5
CCDC84-205ENST00000528088 KCNE1P15382 129 aa11.91□□□□□ -0.5
CCDC84-205ENST00000528088 NR2F2P24468 414 aa11.91□□□□□ -0.5
CCDC84-205ENST00000528088 ERVFC1P60507 584 aa11.91□□□□□ -0.5
CCDC84-205ENST00000528088 TFAMQ00059 246 aaKnown RBP11.91□□□□□ -0.5
CCDC84-205ENST00000528088 MORC3Q14149 939 aa11.91□□□□□ -0.5
CCDC84-205ENST00000528088 SWI5Q1ZZU3 235 aa11.91□□□□□ -0.5
CCDC84-205ENST00000528088 CAVIN1Q6NZI2 390 aaKnown RBP11.91□□□□□ -0.5
CCDC84-205ENST00000528088 RBM23Q86U06 439 aaKnown RBP11.91□□□□□ -0.5
CCDC84-205ENST00000528088 BPHLQ86WA6 291 aaPredicted RBP11.91□□□□□ -0.5
CCDC84-205ENST00000528088 CBWD2Q8IUF1 395 aa11.91□□□□□ -0.5
CCDC84-205ENST00000528088 BRSK2Q8IWQ3 736 aa11.91□□□□□ -0.5
CCDC84-205ENST00000528088 ZNF511Q8NB15 262 aa11.91□□□□□ -0.5
CCDC84-205ENST00000528088 GSTCDQ8NEC7 633 aa11.91□□□□□ -0.5
CCDC84-205ENST00000528088 BEST2Q8NFU1 509 aa11.91□□□□□ -0.5
CCDC84-205ENST00000528088 C18orf25Q96B23 403 aaPredicted RBP11.91□□□□□ -0.5
CCDC84-205ENST00000528088 ZMAT2Q96NC0 199 aaKnown RBP11.91□□□□□ -0.5
CCDC84-205ENST00000528088 PPP1R10Q96QC0 940 aaKnown RBP11.91□□□□□ -0.5
CCDC84-205ENST00000528088 FNBP1Q96RU3 617 aa11.91□□□□□ -0.5
CCDC84-205ENST00000528088 ENTPD7Q9NQZ7 604 aa11.91□□□□□ -0.5
CCDC84-205ENST00000528088 UBQLN1Q9UMX0 589 aaKnown RBP11.91□□□□□ -0.5
CCDC84-205ENST00000528088 PER2O15055 1255 aa11.9□□□□□ -0.5
CCDC84-205ENST00000528088 B4GALT3O60512 393 aa11.9□□□□□ -0.5
CCDC84-205ENST00000528088 TBX10O75333 385 aa11.9□□□□□ -0.5
CCDC84-205ENST00000528088 S1PR4O95977 384 aa11.9□□□□□ -0.5
CCDC84-205ENST00000528088 NFICP08651 508 aa11.9□□□□□ -0.5
CCDC84-205ENST00000528088 TMEM191BP0C7N4 346 aa11.9□□□□□ -0.5
CCDC84-205ENST00000528088 SCNN1AP37088 669 aa11.9□□□□□ -0.5
CCDC84-205ENST00000528088 ATP1A2P50993 1020 aa11.9□□□□□ -0.5
CCDC84-205ENST00000528088 RBM10P98175 930 aaKnown RBP11.9□□□□□ -0.5
CCDC84-205ENST00000528088 DSC1Q08554 894 aa11.9□□□□□ -0.5
CCDC84-205ENST00000528088 BMS1Q14692 1282 aaKnown RBP11.9□□□□□ -0.5
CCDC84-205ENST00000528088 SURF1Q15526 300 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms