RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 MRPL58Q14197 206 aaKnown RBP16.82■□□□□ 0.28
CAPN1-213ENST00000527897 BECN1Q14457 450 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 UVSSAQ2YD98 709 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 FAM26FQ5R3K3 315 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 SUGP1Q8IWZ8 645 aaKnown RBP16.82■□□□□ 0.28
CAPN1-213ENST00000527897 EFCAB13Q8IY85 973 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 UBALD2Q8IYN6 164 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 LEO1Q8WVC0 666 aaPredicted RBP16.82■□□□□ 0.28
CAPN1-213ENST00000527897 RSAD2Q8WXG1 361 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 SENP8Q96LD8 212 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 C7orf25Q9BPX7 421 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 KCNK12Q9HB15 430 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 SERTAD1Q9UHV2 236 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 C2CD2Q9Y426 696 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 WDFY4Q6ZS81 3184 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 DOCK8Q8NF50 2099 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 SCN1AP35498 2009 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 A0A1B0GVL5 298 aa16.81■□□□□ 0.28
CAPN1-213ENST00000527897 TBC1D4O60343 1298 aa16.81■□□□□ 0.28
CAPN1-213ENST00000527897 LDHAP00338 332 aaKnown RBP16.81■□□□□ 0.28
CAPN1-213ENST00000527897 OR4Q2P0C623 313 aa16.81■□□□□ 0.28
CAPN1-213ENST00000527897 ODC1P11926 461 aa16.81■□□□□ 0.28
CAPN1-213ENST00000527897 ATF2P15336 505 aa16.81■□□□□ 0.28
CAPN1-213ENST00000527897 WNT7BP56706 349 aa16.81■□□□□ 0.28
CAPN1-213ENST00000527897 LILRA4P59901 499 aa16.81■□□□□ 0.28
CAPN1-213ENST00000527897 ADCY1Q08828 1119 aa16.81■□□□□ 0.28
CAPN1-213ENST00000527897 OVOS1Q6IE37 1185 aa16.81■□□□□ 0.28
CAPN1-213ENST00000527897 NELFCDQ8IXH7 590 aa16.81■□□□□ 0.28
CAPN1-213ENST00000527897 PGLYRP2Q96PD5 576 aa16.81■□□□□ 0.28
CAPN1-213ENST00000527897 PYM1Q9BRP8 204 aaKnown RBP16.81■□□□□ 0.28
CAPN1-213ENST00000527897 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.81■□□□□ 0.28
CAPN1-213ENST00000527897 SPTLC1O15269 473 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 EXTL3O43909 919 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 ABLIM3O94929 683 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 SEC24AO95486 1093 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 PDGFBP01127 241 aaPredicted RBP16.8■□□□□ 0.28
CAPN1-213ENST00000527897 PFKFB1P16118 471 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 AARSP49588 968 aaKnown RBP eCLIP16.8■□□□□ 0.28
CAPN1-213ENST00000527897 CDR1P51861 262 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 TDGQ13569 410 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 CUL4BQ13620 913 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 PABPC1LQ4VXU2 614 aaKnown RBP16.8■□□□□ 0.28
CAPN1-213ENST00000527897 TPGS2Q68CL5 300 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 RNF19BQ6ZMZ0 732 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 UNC13DQ70J99 1090 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 BRSK2Q8IWQ3 736 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 ITFG1Q8TB96 612 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 ING5Q8WYH8 240 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 ASIC4Q96FT7 647 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 FAM84AQ96KN4 292 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 SLC39A2Q9NP94 309 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 EPS15L1Q9UBC2 864 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 DNMT3BQ9UBC3 853 aaKnown RBP16.8■□□□□ 0.28
CAPN1-213ENST00000527897 ATP6V1DQ9Y5K8 247 aa16.8■□□□□ 0.28
CAPN1-213ENST00000527897 ANO9A1A5B4 782 aa16.79■□□□□ 0.28
CAPN1-213ENST00000527897 PIRO00625 290 aa16.79■□□□□ 0.28
CAPN1-213ENST00000527897 EIF3DO15371 548 aaKnown RBP eCLIP16.79■□□□□ 0.28
CAPN1-213ENST00000527897 PAPLNO95428 1278 aa16.79■□□□□ 0.28
CAPN1-213ENST00000527897 LAMP2P13473 410 aa16.79■□□□□ 0.28
CAPN1-213ENST00000527897 TAF6P49848 677 aa16.79■□□□□ 0.28
CAPN1-213ENST00000527897 GPD1LQ8N335 351 aa16.79■□□□□ 0.28
CAPN1-213ENST00000527897 FBXL6Q8N531 539 aa16.79■□□□□ 0.28
CAPN1-213ENST00000527897 RDH13Q8NBN7 331 aa16.79■□□□□ 0.28
CAPN1-213ENST00000527897 CORO1BQ9BR76 489 aa16.79■□□□□ 0.28
CAPN1-213ENST00000527897 MFSD1Q9H3U5 465 aa16.79■□□□□ 0.28
CAPN1-213ENST00000527897 PDE11AQ9HCR9 933 aa16.79■□□□□ 0.28
CAPN1-213ENST00000527897 IGSF9Q9P2J2 1179 aa16.79■□□□□ 0.28
CAPN1-213ENST00000527897 AFF4Q9UHB7 1163 aaKnown RBP16.79■□□□□ 0.28
CAPN1-213ENST00000527897 FBXL21Q9UKT6 434 aa16.79■□□□□ 0.28
CAPN1-213ENST00000527897 INSL5Q9Y5Q6 135 aa16.79■□□□□ 0.28
CAPN1-213ENST00000527897 ARHGEF37A1IGU5 675 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 OR6C75A6NL08 312 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 CYB561D2O14569 222 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 CLIC2O15247 247 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 NARSO43776 548 aaKnown RBP16.78■□□□□ 0.28
CAPN1-213ENST00000527897 OAZ2O95190 189 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 ITGB3P05106 788 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 RHOP08100 348 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 KRT19P08727 400 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 TMEM191BP0C7N4 346 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 SLFN14P0C7P3 912 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 TYMPP19971 482 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 CMA1P23946 247 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 POLR2BP30876 1174 aaKnown RBP16.78■□□□□ 0.28
CAPN1-213ENST00000527897 HOXD13P35453 343 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 POU5F1Q01860 360 aaKnown RBP16.78■□□□□ 0.28
CAPN1-213ENST00000527897 TWF1Q12792 350 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 LMBRD2Q68DH5 695 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-213ENST00000527897 CNNM4Q6P4Q7 775 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 RTL10Q7L3V2 364 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 BMP8AQ7Z5Y6 402 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 METTL23Q86XA0 190 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 TCEAL8Q8IYN2 117 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 ELMOD1Q8N336 334 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 CACTINQ8WUQ7 758 aaKnown RBP16.78■□□□□ 0.28
CAPN1-213ENST00000527897 FGF13Q92913 245 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 TMEM209Q96SK2 561 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 GDPD2Q9HCC8 539 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 HSPBP1Q9NZL4 362 aa16.78■□□□□ 0.28
CAPN1-213ENST00000527897 CDH7Q9ULB5 785 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms