RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, human

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD7-205	ENST00000527825	RANBP6	O60518	1105 aa	Known RBP	4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	GADD45B	O75293	160 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	GLUD1	P00367	558 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	GHRH	P01286	108 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	TDGF1	P13385	188 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	TCF7	P36402	384 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	AK2	P54819	239 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	SATB1	Q01826	763 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	RNASEL	Q05823	741 aa	Known RBP	4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	SCAP	Q12770	1279 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	LRRC32	Q14392	662 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	PGM5	Q15124	567 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	CDC37	Q16543	378 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	ECM1	Q16610	540 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	PRSS36	Q5K4E3	855 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	SARM1	Q6SZW1	724 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	LRRC55	Q6ZSA7	311 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	PLA2G4D	Q86XP0	818 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	DMRTC2	Q8IXT2	367 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	FMR1NB	Q8N0W7	255 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	CLASRP	Q8N2M8	674 aa	Known RBP	4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	NME8	Q8N427	588 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	DEFB124	Q8NES8	71 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	SPATA18	Q8TC71	538 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	STRBP	Q96SI9	672 aa	Known RBP	4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	KXD1	Q9BQD3	176 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	PDCD2L	Q9BRP1	358 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	RPP25	Q9BUL9	199 aa	Known RBP	4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	UBXN6	Q9BZV1	441 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	PUS7L	Q9H0K6	701 aa	Known RBP	4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	SMG9	Q9H0W8	520 aa	Known RBP	4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	NAPB	Q9H115	298 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	ADAMTS10	Q9H324	1103 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	BOLA2	Q9H3K6	86 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	L2HGDH	Q9H9P8	463 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	LMAN1L	Q9HAT1	526 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	TMEM9B	Q9NQ34	198 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	HEBP1	Q9NRV9	189 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	TOMM22	Q9NS69	142 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	CNTN3	Q9P232	1028 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	CDH7	Q9ULB5	785 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	SSX2IP	Q9Y2D8	614 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	PTPRB	P23467	1997 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	CEP192	Q8TEP8	1941 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	IGSF10	Q6WRI0	2623 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	AKAP13	Q12802	2813 aa		4.54	□□□□□ -1.68
CHD7-205	ENST00000527825	ITPR1	Q14643	2758 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	SDK1	Q7Z5N4	2213 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	KDM3A	Q9Y4C1	1321 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	UNC79	Q9P2D8	2635 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	PLXNB3	Q9ULL4	1909 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	SCO2	A0A1W2PP80	73 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	MBLAC1	A4D2B0	266 aa	Predicted RBP	4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	KIF2A	O00139	706 aa	Predicted RBP	4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	NEMF	O60524	1076 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	NMT2	O60551	498 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	RFPL2	O75678	378 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	RPP40	O75818	363 aa	Known RBP	4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	UROD	P06132	367 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	CNP	P09543	421 aa	Known RBP	4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	ZSCAN22	P10073	491 aa	Predicted RBP	4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	TOP1	P11387	765 aa	Known RBP	4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	SIM1	P81133	766 aa	Predicted RBP	4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	NRG1	Q02297	640 aa	Predicted RBP	4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	CREB5	Q02930	508 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	EHHADH	Q08426	723 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	HYAL2	Q12891	473 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	WTAP	Q15007	396 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	ELF2	Q15723	593 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	HSP90AB4P	Q58FF6	505 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	GPATCH4	Q5T3I0	446 aa	Known RBP	4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	CEP85	Q6P2H3	762 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	VSIG10L	Q86VR7	867 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	WDR5B	Q86VZ2	330 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	SPEM1	Q8N4L4	309 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	CHCHD4	Q8N4Q1	142 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	IQUB	Q8NA54	791 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	GIMAP8	Q8ND71	665 aa	Predicted RBP	4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	CCDC112	Q8NEF3	446 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	SSH3	Q8TE77	659 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	GAB3	Q8WWW8	586 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	FAM3C	Q92520	227 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	TTC9	Q92623	222 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	PLD4	Q96BZ4	506 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	IGSF21	Q96ID5	467 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	SPACA7	Q96KW9	195 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	TTC14	Q96N46	770 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	RHOBTB2	Q9BYZ6	727 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	UBA5	Q9GZZ9	404 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	GBP3	Q9H0R5	595 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	SMARCAD1	Q9H4L7	1026 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	PLEKHA4	Q9H4M7	779 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	AZI2	Q9H6S1	392 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	IL1RAPL2	Q9NP60	686 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	ST3GAL5	Q9UNP4	418 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	RAX	Q9Y2V3	346 aa		4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	NOC2L	Q9Y3T9	749 aa	Known RBP	4.53	□□□□□ -1.68
CHD7-205	ENST00000527825	PCDHA2	Q9Y5H9	948 aa		4.53	□□□□□ -1.68

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