RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 KCNB1Q14721 858 aa14.46□□□□□ -0.09
CAPN1-209ENST00000527469 SV2CQ496J9 727 aa14.46□□□□□ -0.09
CAPN1-209ENST00000527469 METTL23Q86XA0 190 aa14.46□□□□□ -0.09
CAPN1-209ENST00000527469 EFCAB13Q8IY85 973 aa14.46□□□□□ -0.09
CAPN1-209ENST00000527469 SUSD6Q92537 303 aa14.46□□□□□ -0.09
CAPN1-209ENST00000527469 ITGA11Q9UKX5 1188 aa14.46□□□□□ -0.09
CAPN1-209ENST00000527469 NR2E1Q9Y466 385 aa14.46□□□□□ -0.09
CAPN1-209ENST00000527469 CCDC195A0A1B0GUA6 201 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 PPEF2O14830 753 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 PRPF40AO75400 957 aaKnown RBP14.45□□□□□ -0.1
CAPN1-209ENST00000527469 ITGB3P05106 788 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 CPB1P15086 417 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 TNNI1P19237 187 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 SP100P23497 879 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-209ENST00000527469 POLR2BP30876 1174 aaKnown RBP14.45□□□□□ -0.1
CAPN1-209ENST00000527469 LILRA4P59901 499 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 RAB33AQ14088 237 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 DUOXA2Q1HG44 320 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 PPM1LQ5SGD2 360 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 C15orf39Q6ZRI6 1047 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 CCDC149Q6ZUS6 474 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 GPR149Q86SP6 731 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 TMEM130Q8N3G9 435 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 CSGALNACT2Q8N6G5 542 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 SMG7Q92540 1137 aaKnown RBP14.45□□□□□ -0.1
CAPN1-209ENST00000527469 SMARCE1Q969G3 411 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 CCDC127Q96BQ5 260 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 SENP8Q96LD8 212 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 TIGD1Q96MW7 591 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 OXCT2Q9BYC2 517 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-209ENST00000527469 MTMR12Q9C0I1 747 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 DSEQ9UL01 958 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 AGAP1Q9UPQ3 857 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 MAPK8IP1Q9UQF2 711 aa14.45□□□□□ -0.1
CAPN1-209ENST00000527469 TIMM13Q9Y5L4 95 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-209ENST00000527469 ANO9A1A5B4 782 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 M0QZQ0 153 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 PIRO00625 290 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 PDXKO00764 312 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 CYB561D2O14569 222 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 PRRG1O14668 218 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 ADAM12O43184 909 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 XYLBO75191 536 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 RFPL2O75678 378 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 NR3C1P04150 777 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 C8AP07357 584 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 RBP5P82980 135 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 BFSP1Q12934 665 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 MYO1EQ12965 1108 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 SNW1Q13573 536 aaKnown RBP14.44□□□□□ -0.1
CAPN1-209ENST00000527469 LMBRD2Q68DH5 695 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-209ENST00000527469 OVOS1Q6IE37 1185 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 LILRA6Q6PI73 481 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 CYP26C1Q6V0L0 522 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 WDR49Q8IV35 697 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 C12orf56Q8IXR9 622 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 ENGASEQ8NFI3 743 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 CMASQ8NFW8 434 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-209ENST00000527469 SLC7A14Q8TBB6 771 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 GTPBP4Q9BZE4 634 aaKnown RBP14.44□□□□□ -0.1
CAPN1-209ENST00000527469 INTS13Q9NVM9 706 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 ZDHHC7Q9NXF8 308 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 CDH22Q9UJ99 828 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 FBXL5Q9UKA1 691 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 FBXW11Q9UKB1 542 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 POLIQ9UNA4 740 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 FRMD4BQ9Y2L6 1034 aa14.44□□□□□ -0.1
CAPN1-209ENST00000527469 KPNA7A9QM74 516 aa14.43□□□□□ -0.1
CAPN1-209ENST00000527469 GADD45BO75293 160 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-209ENST00000527469 ZMYND10O75800 440 aa14.43□□□□□ -0.1
CAPN1-209ENST00000527469 TYMPP19971 482 aa14.43□□□□□ -0.1
CAPN1-209ENST00000527469 AARSP49588 968 aaKnown RBP eCLIP14.43□□□□□ -0.1
CAPN1-209ENST00000527469 WNT7BP56706 349 aa14.43□□□□□ -0.1
CAPN1-209ENST00000527469 ROR1Q01973 937 aa14.43□□□□□ -0.1
CAPN1-209ENST00000527469 CYP24A1Q07973 514 aa14.43□□□□□ -0.1
CAPN1-209ENST00000527469 SLC8B1Q6J4K2 584 aa14.43□□□□□ -0.1
CAPN1-209ENST00000527469 THEM5Q8N1Q8 247 aa14.43□□□□□ -0.1
CAPN1-209ENST00000527469 GUF1Q8N442 669 aaKnown RBP14.43□□□□□ -0.1
CAPN1-209ENST00000527469 C1orf127Q8N9H9 656 aa14.43□□□□□ -0.1
CAPN1-209ENST00000527469 ZNF461Q8TAF7 563 aa14.43□□□□□ -0.1
CAPN1-209ENST00000527469 GSDMAQ96QA5 445 aa14.43□□□□□ -0.1
CAPN1-209ENST00000527469 POMKQ9H5K3 350 aa14.43□□□□□ -0.1
CAPN1-209ENST00000527469 VWA8A3KMH1 1905 aa14.43□□□□□ -0.1
CAPN1-209ENST00000527469 ANK1P16157 1881 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 PLXNA3P51805 1871 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 OR6C75A6NL08 312 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 SPTLC1O15269 473 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 HUS1O60921 280 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 PHACTR2O75167 634 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 OAZ2O95190 189 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 LRG1P02750 347 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 HNRNPA1P09651 372 aaKnown RBP eCLIP14.42□□□□□ -0.1
CAPN1-209ENST00000527469 RPL13P26373 211 aaKnown RBP14.42□□□□□ -0.1
CAPN1-209ENST00000527469 UBE2HP62256 183 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 TRPC3Q13507 836 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 STIM1Q13586 685 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 PSMD6Q15008 389 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 CEP135Q66GS9 1140 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 TPGS2Q68CL5 300 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 RSPO2Q6UXX9 243 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms