RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 CDCA5Q96FF9 252 aa13.27□□□□□ -0.29
CAPN1-208ENST00000527323 USTQ9Y2C2 406 aa13.27□□□□□ -0.29
CAPN1-208ENST00000527323 FAM47DPA6NHR8 397 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 UNC5CO95185 931 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 ADRB2P07550 413 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 RALAP11233 206 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 KRT15P19012 456 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 STAT4Q14765 748 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 CGB2Q6NT52 195 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 HERPUD2Q9BSE4 406 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 MYLK2Q9H1R3 596 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 GPRC5CQ9NQ84 441 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 EXOC1LA0A1B0GW35 172 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 PLS3P13797 630 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 EIF2AK2P19525 551 aaKnown RBP13.26□□□□□ -0.29
CAPN1-208ENST00000527323 RRM1P23921 792 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 TARSP26639 723 aaKnown RBP13.26□□□□□ -0.29
CAPN1-208ENST00000527323 PEX19P40855 299 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 ALCAMQ13740 583 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 SNRNP35Q16560 246 aaKnown RBP13.26□□□□□ -0.29
CAPN1-208ENST00000527323 CAPRIN2Q6IMN6 1127 aaKnown RBP13.26□□□□□ -0.29
CAPN1-208ENST00000527323 ZNF449Q6P9G9 518 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 EEPD1Q7L9B9 569 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 SCYL3Q8IZE3 742 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 CCDC89Q8N998 374 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 ZNF280CQ8ND82 737 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 IL31RAQ8NI17 732 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 TAS1R2Q8TE23 839 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 TMEM237Q96Q45 408 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 LRRC37BQ96QE4 947 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 RBM15Q96T37 977 aaKnown RBP eCLIP13.26□□□□□ -0.29
CAPN1-208ENST00000527323 ADAM33Q9BZ11 813 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 TOPORSQ9NS56 1045 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-208ENST00000527323 SLC5A4Q9NY91 659 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 COL20A1Q9P218 1284 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 HAO1Q9UJM8 370 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.26□□□□□ -0.29
CAPN1-208ENST00000527323 TMEM150BA6NC51 233 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 MYCLP12524 364 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-208ENST00000527323 ALDH3A1P30838 453 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 LLGL2Q6P1M3 1020 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 APOBEC3FQ8IUX4 373 aaKnown RBP13.26□□□□□ -0.29
CAPN1-208ENST00000527323 BBOF1Q8ND07 529 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 PI4K2AQ9BTU6 479 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 SAYSD1Q9NPB0 183 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 MRPL11Q9Y3B7 192 aaKnown RBP13.26□□□□□ -0.29
CAPN1-208ENST00000527323 MYH11P35749 1972 aa13.26□□□□□ -0.29
CAPN1-208ENST00000527323 SSC5DA1L4H1 1573 aa13.25□□□□□ -0.29
CAPN1-208ENST00000527323 GLTPD2A6NH11 291 aa13.25□□□□□ -0.29
CAPN1-208ENST00000527323 P4HBP07237 508 aaKnown RBP13.25□□□□□ -0.29
CAPN1-208ENST00000527323 CHRM1P11229 460 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-208ENST00000527323 MAGEA4P43358 317 aa13.25□□□□□ -0.29
CAPN1-208ENST00000527323 FAM102BQ5T8I3 360 aa13.25□□□□□ -0.29
CAPN1-208ENST00000527323 FKBP1CQ5VVH2 108 aa13.25□□□□□ -0.29
CAPN1-208ENST00000527323 PHTF1Q9UMS5 762 aa13.25□□□□□ -0.29
CAPN1-208ENST00000527323 CLGNO14967 610 aa13.25□□□□□ -0.29
CAPN1-208ENST00000527323 MAPK13O15264 365 aa13.25□□□□□ -0.29
CAPN1-208ENST00000527323 BACE1P56817 501 aa13.25□□□□□ -0.29
CAPN1-208ENST00000527323 WDR4P57081 412 aaKnown RBP13.25□□□□□ -0.29
CAPN1-208ENST00000527323 CLEC16AQ2KHT3 1053 aa13.25□□□□□ -0.29
CAPN1-208ENST00000527323 NAIF1Q69YI7 327 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-208ENST00000527323 FBXL13Q8NEE6 735 aa13.25□□□□□ -0.29
CAPN1-208ENST00000527323 HELQQ8TDG4 1101 aa13.25□□□□□ -0.29
CAPN1-208ENST00000527323 SPOCK2Q92563 424 aa13.25□□□□□ -0.29
CAPN1-208ENST00000527323 SLCO1B3Q9NPD5 702 aa13.25□□□□□ -0.29
CAPN1-208ENST00000527323 RAB20Q9NX57 234 aa13.25□□□□□ -0.29
CAPN1-208ENST00000527323 PSME4Q14997 1843 aa13.25□□□□□ -0.29
CAPN1-208ENST00000527323 TCEA3O75764 348 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 RNASELQ05823 741 aaKnown RBP13.24□□□□□ -0.29
CAPN1-208ENST00000527323 P3H1Q32P28 736 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 DCAF15Q66K64 600 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 KAZNQ674X7 775 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 VPS37BQ9H9H4 285 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 TCEAL9Q9UHQ7 104 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 LGALS13Q9UHV8 139 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 TELO2Q9Y4R8 837 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 SNCAIPQ9Y6H5 919 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 CCNB1P14635 433 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 PCK1P35558 622 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 SKIV2L2P42285 1042 aaKnown RBP13.24□□□□□ -0.29
CAPN1-208ENST00000527323 RARRES1P49788 294 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 POLGP54098 1239 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-208ENST00000527323 FSTL1Q12841 308 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 SPARCL1Q14515 664 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 C4orf33Q8N1A6 199 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 LRRC8CQ8TDW0 803 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 MXRA8Q9BRK3 442 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 USH1CQ9Y6N9 552 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 ADGRA3Q8IWK6 1321 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 H0Y3Z8 333 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 TBC1D12O60347 775 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 ATP5HO75947 161 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 CYP2C8P10632 490 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 CD58P19256 250 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 NSFP46459 744 aaKnown RBP13.24□□□□□ -0.29
CAPN1-208ENST00000527323 C12orf56Q8IXR9 622 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 MCOLN2Q8IZK6 566 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 PARD3BQ8TEW8 1205 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 FAM84AQ96KN4 292 aa13.24□□□□□ -0.29
CAPN1-208ENST00000527323 CFAP57Q96MR6 1250 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms