RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 TRIM49P0CI25 452 aa13.93□□□□□ -0.18
SMPD1-202ENST00000526280 TRIM49CP0CI26 452 aa13.93□□□□□ -0.18
SMPD1-202ENST00000526280 TKTP29401 623 aaKnown RBP13.93□□□□□ -0.18
SMPD1-202ENST00000526280 PPP3CAQ08209 521 aa13.93□□□□□ -0.18
SMPD1-202ENST00000526280 HYAL1Q12794 435 aa13.93□□□□□ -0.18
SMPD1-202ENST00000526280 CCDC85BQ15834 202 aaPredicted RBP13.93□□□□□ -0.18
SMPD1-202ENST00000526280 ZACNQ401N2 412 aa13.93□□□□□ -0.18
SMPD1-202ENST00000526280 TDRD10Q5VZ19 366 aaKnown RBP13.93□□□□□ -0.18
SMPD1-202ENST00000526280 C15orf39Q6ZRI6 1047 aa13.93□□□□□ -0.18
SMPD1-202ENST00000526280 FRMD5Q7Z6J6 570 aa13.93□□□□□ -0.18
SMPD1-202ENST00000526280 RBM23Q86U06 439 aaKnown RBP13.93□□□□□ -0.18
SMPD1-202ENST00000526280 LNX1Q8TBB1 728 aaPredicted RBP13.93□□□□□ -0.18
SMPD1-202ENST00000526280 PIK3R5Q8WYR1 880 aa13.93□□□□□ -0.18
SMPD1-202ENST00000526280 SENP8Q96LD8 212 aa13.93□□□□□ -0.18
SMPD1-202ENST00000526280 ZNF560Q96MR9 790 aa13.93□□□□□ -0.18
SMPD1-202ENST00000526280 TLE6Q9H808 572 aa13.93□□□□□ -0.18
SMPD1-202ENST00000526280 RXFP1Q9HBX9 757 aa13.93□□□□□ -0.18
SMPD1-202ENST00000526280 METTL14Q9HCE5 456 aaKnown RBP13.93□□□□□ -0.18
SMPD1-202ENST00000526280 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.93□□□□□ -0.18
SMPD1-202ENST00000526280 ANO10Q9NW15 660 aa13.93□□□□□ -0.18
SMPD1-202ENST00000526280 ARMCX3Q9UH62 379 aaPredicted RBP13.93□□□□□ -0.18
SMPD1-202ENST00000526280 PCDHB8Q9UN66 801 aa13.93□□□□□ -0.18
SMPD1-202ENST00000526280 KPNA7A9QM74 516 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 PER2O15055 1255 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 PHACTR2O75167 634 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 LETM1O95202 739 aaPredicted RBP13.92□□□□□ -0.18
SMPD1-202ENST00000526280 GNA14O95837 355 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 CNPP09543 421 aaKnown RBP13.92□□□□□ -0.18
SMPD1-202ENST00000526280 GTF2H1P32780 548 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 CA8P35219 290 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 NRIP1P48552 1158 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 MRPL58Q14197 206 aaKnown RBP13.92□□□□□ -0.18
SMPD1-202ENST00000526280 COL19A1Q14993 1142 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 STX1AQ16623 288 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 DUSP6Q16828 381 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 SV2CQ496J9 727 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 PDXDC1Q6P996 788 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 PRSS55Q6UWB4 352 aaPredicted RBP13.92□□□□□ -0.18
SMPD1-202ENST00000526280 DSTYKQ6XUX3 929 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 SV2AQ7L0J3 742 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 APPL2Q8NEU8 664 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 PPM1EQ8WY54 764 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 HPDLQ96IR7 371 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 KLHL5Q96PQ7 755 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 CDCA3Q99618 268 aaPredicted RBP13.92□□□□□ -0.18
SMPD1-202ENST00000526280 EMILIN2Q9BXX0 1053 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 FNIP2Q9P278 1114 aa13.92□□□□□ -0.18
SMPD1-202ENST00000526280 R3HCC1Q9Y3T6 440 aaKnown RBP13.92□□□□□ -0.18
SMPD1-202ENST00000526280 ARHGEF37A1IGU5 675 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 CYB561D2O14569 222 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 TEX28O15482 410 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 NCK2O43639 380 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 STX10O60499 249 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 CLASP2O75122 1294 aaKnown RBP13.91□□□□□ -0.18
SMPD1-202ENST00000526280 OAZ2O95190 189 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 VNN1O95497 513 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 CYP11A1P05108 521 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 TYMPP19971 482 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 GTF2F1P35269 517 aaKnown RBP eCLIP13.91□□□□□ -0.18
SMPD1-202ENST00000526280 GCLMP48507 274 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 MARSP56192 900 aaKnown RBP13.91□□□□□ -0.18
SMPD1-202ENST00000526280 CREMQ03060 361 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 TYRO3Q06418 890 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 MYO1EQ12965 1108 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 BIRC3Q13489 604 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 TRPC3Q13507 836 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 PSMD5Q16401 504 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 CCDC40Q4G0X9 1142 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 VARS2Q5ST30 1063 aaKnown RBP13.91□□□□□ -0.18
SMPD1-202ENST00000526280 ANKS3Q6ZW76 656 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 EFHBQ8N7U6 833 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 CLSTN3Q9BQT9 956 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 IGFLR1Q9H665 355 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 TMEM8AQ9HCN3 771 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 GDAP2Q9NXN4 497 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 MTRRQ9UBK8 725 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 BACE2Q9Y5Z0 518 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 PRUNE2Q8WUY3 3088 aa13.91□□□□□ -0.18
SMPD1-202ENST00000526280 FSD2A1L4K1 749 aa13.9□□□□□ -0.18
SMPD1-202ENST00000526280 TBC1D4O60343 1298 aa13.9□□□□□ -0.18
SMPD1-202ENST00000526280 STAU1O95793 577 aaKnown RBP13.9□□□□□ -0.18
SMPD1-202ENST00000526280 ODC1P11926 461 aa13.9□□□□□ -0.18
SMPD1-202ENST00000526280 KLRC2P26717 231 aa13.9□□□□□ -0.18
SMPD1-202ENST00000526280 ATICP31939 592 aa13.9□□□□□ -0.18
SMPD1-202ENST00000526280 MYL6P60660 151 aa13.9□□□□□ -0.18
SMPD1-202ENST00000526280 ADAM15Q13444 863 aa13.9□□□□□ -0.18
SMPD1-202ENST00000526280 NCOA4Q13772 614 aa13.9□□□□□ -0.18
SMPD1-202ENST00000526280 KCNC3Q14003 757 aa13.9□□□□□ -0.18
SMPD1-202ENST00000526280 CTC1Q2NKJ3 1217 aa13.9□□□□□ -0.18
SMPD1-202ENST00000526280 DCAF17Q5H9S7 520 aaPredicted RBP13.9□□□□□ -0.18
SMPD1-202ENST00000526280 TCERG1LQ5VWI1 586 aa13.9□□□□□ -0.18
SMPD1-202ENST00000526280 C11orf57Q6ZUT1 292 aaPredicted RBP13.9□□□□□ -0.18
SMPD1-202ENST00000526280 IRF2BP1Q8IU81 584 aa13.9□□□□□ -0.18
SMPD1-202ENST00000526280 ENOX1Q8TC92 643 aaKnown RBP13.9□□□□□ -0.18
SMPD1-202ENST00000526280 SLC35C1Q96A29 364 aa13.9□□□□□ -0.18
SMPD1-202ENST00000526280 XYLT2Q9H1B5 865 aa13.9□□□□□ -0.18
SMPD1-202ENST00000526280 VRTNQ9H8Y1 702 aa13.9□□□□□ -0.18
SMPD1-202ENST00000526280 BRWD1Q9NSI6 2320 aa13.9□□□□□ -0.18
SMPD1-202ENST00000526280 DSEQ9UL01 958 aa13.9□□□□□ -0.18
SMPD1-202ENST00000526280 TIMM13Q9Y5L4 95 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms