RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 BCAP31P51572 246 aa14.3□□□□□ -0.12
LRRK1-202ENST00000525284 KYNUQ16719 465 aa14.3□□□□□ -0.12
LRRK1-202ENST00000525284 SYDE2Q5VT97 1194 aa14.3□□□□□ -0.12
LRRK1-202ENST00000525284 APRTP07741 180 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 AKAP5P24588 427 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 BTN2A1Q7KYR7 527 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 LRRC8DQ7L1W4 858 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 OSBPL6Q9BZF3 934 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 PBRM1Q86U86 1689 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 ALOX15P16050 662 aaPredicted RBP14.29□□□□□ -0.12
LRRK1-202ENST00000525284 SCP2P22307 547 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 PSMC5P62195 406 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 BTBD8Q5XKL5 378 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 CYFIP1Q7L576 1253 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 COMMD2Q86X83 199 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 SH3TC2Q8TF17 1288 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 KLF6Q99612 283 aaPredicted RBP14.29□□□□□ -0.12
LRRK1-202ENST00000525284 PACSIN1Q9BY11 444 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 ZNF624Q9P2J8 865 aaPredicted RBP14.29□□□□□ -0.12
LRRK1-202ENST00000525284 GCC2Q8IWJ2 1684 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 MAGI3Q5TCQ9 1506 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 ZC3H4Q9UPT8 1303 aaKnown RBP14.29□□□□□ -0.12
LRRK1-202ENST00000525284 A0A1W2PRG6 482 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 DENND3A2RUS2 1198 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 CNOT3O75175 753 aaKnown RBP14.29□□□□□ -0.12
LRRK1-202ENST00000525284 ATP1A1P05023 1023 aaKnown RBP14.29□□□□□ -0.12
LRRK1-202ENST00000525284 ALOX12P18054 663 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.29□□□□□ -0.12
LRRK1-202ENST00000525284 BEST2Q8NFU1 509 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 SPATA16Q9BXB7 569 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 UBE2OQ9C0C9 1292 aaKnown RBP14.29□□□□□ -0.12
LRRK1-202ENST00000525284 TJP2Q9UDY2 1190 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 KLHL3Q9UH77 587 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 CHKBQ9Y259 395 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 A2MP01023 1474 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 SSH2Q76I76 1423 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 RGS20O76081 388 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 NR3C1P04150 777 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 TARSP26639 723 aaKnown RBP14.29□□□□□ -0.12
LRRK1-202ENST00000525284 USP17L2Q6R6M4 530 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 PPP2R3BQ9Y5P8 575 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 SNX13Q9Y5W8 968 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 C3orf70A6NLC5 250 aaPredicted RBP14.29□□□□□ -0.12
LRRK1-202ENST00000525284 EIF3HO15372 352 aaKnown RBP eCLIP14.29□□□□□ -0.12
LRRK1-202ENST00000525284 CHI3L1P36222 383 aaPredicted RBP14.29□□□□□ -0.12
LRRK1-202ENST00000525284 ITGB3BPQ13352 177 aaPredicted RBP14.29□□□□□ -0.12
LRRK1-202ENST00000525284 DHX34Q14147 1143 aaKnown RBP14.29□□□□□ -0.12
LRRK1-202ENST00000525284 KPNB1Q14974 876 aaKnown RBP14.29□□□□□ -0.12
LRRK1-202ENST00000525284 PCSK7Q16549 785 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 OLFML1Q6UWY5 402 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 NOD2Q9HC29 1040 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 MRGBPQ9NV56 204 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 CTNNAL1Q9UBT7 734 aa14.29□□□□□ -0.12
LRRK1-202ENST00000525284 BMP3P12645 472 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 ATP6V1B2P21281 511 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 PSMB9P28065 219 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 NANOGNBQ7Z5D8 188 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 CENPLQ8N0S6 344 aaPredicted RBP14.28□□□□□ -0.12
LRRK1-202ENST00000525284 NRDE2Q9H7Z3 1164 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 LGR6Q9HBX8 967 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 TOPORSQ9NS56 1045 aaPredicted RBP14.28□□□□□ -0.12
LRRK1-202ENST00000525284 TFE3P19532 575 aaPredicted RBP14.28□□□□□ -0.12
LRRK1-202ENST00000525284 ITGA3P26006 1051 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 PTPN7P35236 360 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 BYSLQ13895 437 aaKnown RBP14.28□□□□□ -0.12
LRRK1-202ENST00000525284 C12orf60Q5U649 245 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 XPO7Q9UIA9 1087 aaKnown RBP14.28□□□□□ -0.12
LRRK1-202ENST00000525284 SCGNO76038 276 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 TPI1P60174 286 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 ABATP80404 500 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 KCNH2Q12809 1159 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 DRAP1Q14919 205 aaPredicted RBP14.28□□□□□ -0.12
LRRK1-202ENST00000525284 RIC8BQ9NVN3 520 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.28□□□□□ -0.12
LRRK1-202ENST00000525284 TNFAIP2Q03169 654 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 PTK7Q13308 1070 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 DNAJC10Q8IXB1 793 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 CACTIN-AS1Q8N1I8 211 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 EFHBQ8N7U6 833 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 POMGNT2Q8NAT1 580 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 CAPSLQ8WWF8 208 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 MTA3Q9BTC8 594 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 LRRC1Q9BTT6 524 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 EPS8L2Q9H6S3 715 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 FAM217BQ9NTX9 383 aaPredicted RBP14.28□□□□□ -0.12
LRRK1-202ENST00000525284 TMCC3Q9ULS5 477 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 NUP160Q12769 1436 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 CYP2D7A0A087X1C5 515 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 SRP54P61011 504 aaKnown RBP14.28□□□□□ -0.12
LRRK1-202ENST00000525284 ARHGEF6Q15052 776 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 IKBIPQ70UQ0 350 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 MOSPD2Q8NHP6 518 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 SEPT1Q8WYJ6 367 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 PSMC3IPQ9P2W1 217 aaPredicted RBP14.28□□□□□ -0.12
LRRK1-202ENST00000525284 RPS6KB2Q9UBS0 482 aa14.28□□□□□ -0.12
LRRK1-202ENST00000525284 SLC16A4O15374 487 aa14.27□□□□□ -0.12
LRRK1-202ENST00000525284 HNRNPH1P31943 449 aaKnown RBP14.27□□□□□ -0.12
LRRK1-202ENST00000525284 ZNF200P98182 395 aaPredicted RBP14.27□□□□□ -0.12
LRRK1-202ENST00000525284 STX4Q12846 297 aa14.27□□□□□ -0.12
LRRK1-202ENST00000525284 CYP4A22Q5TCH4 519 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms