RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ZBTB16Q05516 673 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 TNP2Q05952 138 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.88□□□□□ -1.63
CD44-213ENST00000525209 ACTN3Q08043 901 aaPredicted RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 AIMP1Q12904 312 aaKnown RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 EIF2B5Q13144 721 aaKnown RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 NAA25Q14CX7 972 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 POU4F3Q15319 338 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 BAK1Q16611 211 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 IFI16Q16666 785 aaKnown RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 KIF4BQ2VIQ3 1234 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 C2orf76Q3KRA6 126 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 FBXO38Q6PIJ6 1188 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 FIGNL1Q6PIW4 674 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 CATSPERGQ6ZRH7 1159 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 PXKQ7Z7A4 578 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 TMEM110Q86TL2 294 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 HID1Q8IV36 788 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 ADGRG2Q8IZP9 1017 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 TAGAPQ8N103 731 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 ADSSL1Q8N142 457 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 TTC39CQ8N584 583 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 SRBD1Q8N5C6 995 aaKnown RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 GOLGA6L1Q8N7Z2 621 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 CYB5D2Q8WUJ1 264 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 HSPH1Q92598 858 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 USP6NLQ92738 828 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 ITFG2Q969R8 447 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 VWCEQ96DN2 955 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 IQCDQ96DY2 449 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 VPS39Q96JC1 886 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 CNDP1Q96KN2 507 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 PPP1R13BQ96KQ4 1090 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 DACH2Q96NX9 599 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 ATP6V0BQ99437 205 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 NTPCRQ9BSD7 190 aaKnown RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 WDR18Q9BV38 432 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 ANO3Q9BYT9 981 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 NT5C3AQ9H0P0 336 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 COPS7BQ9H9Q2 264 aaPredicted RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 SMURF1Q9HCE7 757 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 SEPSECSQ9HD40 501 aaKnown RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 NECTIN3Q9NQS3 549 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 ACSS2Q9NR19 701 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 CATSPERZQ9NTU4 200 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 COL20A1Q9P218 1284 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 TBC1D14Q9P2M4 693 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 EXTL2Q9UBQ6 330 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 GDF2Q9UK05 429 aaPredicted RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 RNF112Q9ULX5 631 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 HPCAL4Q9UM19 191 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 PCDHB12Q9Y5F1 795 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 ST14Q9Y5Y6 855 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 PSAT1Q9Y617 370 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 CFAP20Q9Y6A4 193 aaKnown RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 PIAS3Q9Y6X2 628 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 MROH2BQ7Z745 1585 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 ARHGAP10A1A4S6 786 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 KRT87PA6NCN2 255 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 HMX3A6NHT5 357 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 A8MVJ9 347 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 PTGES3LE9PB15 166 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 ZNF561-AS1K7EIQ3 104 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 PIP5K1BO14986 540 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 VILLO15195 856 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 THAP12O43422 761 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 GHRHP01286 108 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 AFPP02771 609 aaKnown RBP4.87□□□□□ -1.63
CD44-213ENST00000525209 TK1P04183 234 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 ITGA2BP08514 1039 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 CLEC2LP0C7M8 214 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 TMIGD3P0DMS9 266 aaPredicted RBP4.87□□□□□ -1.63
CD44-213ENST00000525209 HSPA1AP0DMV8 641 aaKnown RBP4.87□□□□□ -1.63
CD44-213ENST00000525209 HSPA1BP0DMV9 641 aaKnown RBP4.87□□□□□ -1.63
CD44-213ENST00000525209 MYL4P12829 197 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 LCP1P13796 627 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 HOXB4P17483 251 aaPredicted RBP4.87□□□□□ -1.63
CD44-213ENST00000525209 PTPN2P17706 415 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 PSMA4P25789 261 aaKnown RBP4.87□□□□□ -1.63
CD44-213ENST00000525209 COL8A1P27658 744 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 EEF1DP29692 281 aaKnown RBP4.87□□□□□ -1.63
CD44-213ENST00000525209 KCNC1P48547 511 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 HK3P52790 923 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 PNLIPRP1P54315 467 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 PRKAA2P54646 552 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 RRP1P56182 461 aaKnown RBP4.87□□□□□ -1.63
CD44-213ENST00000525209 YBEYP58557 167 aaPredicted RBP4.87□□□□□ -1.63
CD44-213ENST00000525209 DLG4P78352 724 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 HNRNPUQ00839 825 aaKnown RBP eCLIP4.87□□□□□ -1.63
CD44-213ENST00000525209 DDR1Q08345 913 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 ACAP1Q15027 740 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 DPY19L1Q2PZI1 675 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 CEP55Q53EZ4 464 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 PITRM1Q5JRX3 1037 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 E4F1Q66K89 784 aaPredicted RBP4.87□□□□□ -1.63
CD44-213ENST00000525209 TAF2Q6P1X5 1199 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 SLC2A7Q6PXP3 512 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 KLHL17Q6TDP4 642 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 HHIPL2Q6UWX4 724 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms