RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 CA4P22748 312 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 SLC18A1P54219 525 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 INHBEP58166 350 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 MXRA7P84157 204 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 LMNB2Q03252 620 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 TSNAXIP1Q2TAA8 658 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 C2CD6Q53TS8 623 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 DACT2Q5SW24 774 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 PCNX4Q63HM2 1172 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 TATDN1Q6P1N9 297 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 SH3BP5LQ7L8J4 393 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 HAUS6Q7Z4H7 955 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 CPA5Q8WXQ8 436 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 UPF1Q92900 1129 aaKnown RBP eCLIP19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 ZFP69BQ9UJL9 534 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 FESP07332 822 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 PLS3P13797 630 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 PTPN4P29074 926 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 CRKP46108 304 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 B3GNT9Q6UX72 402 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 CAPN12Q6ZSI9 719 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 OTOAQ7RTW8 1153 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 TDRPQ86YL5 185 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 SH3TC2Q8TF17 1288 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 MRRFQ96E11 262 aaKnown RBP19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 SYT15Q9BQS2 421 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 SIPA1L1O43166 1804 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 BRCA1P38398 1863 aaKnown RBP19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 YDJCA8MPS7 323 aa19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 ABLIM1O14639 778 aa19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 AHCYL1O43865 530 aa19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 NEFHP12036 1026 aa19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 UNGP13051 313 aaPredicted RBP19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 GPC3P51654 580 aa19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 SNRNP35Q16560 246 aaKnown RBP19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 STRIP1Q5VSL9 837 aa19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 HHATQ5VTY9 493 aa19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 CEP128Q6ZU80 1094 aa19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 NLRP9Q7RTR0 991 aa19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 TAS1R2Q8TE23 839 aa19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 ADAM33Q9BZ11 813 aa19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 OSBPL8Q9BZF1 889 aa19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 FOXP3Q9BZS1 431 aa19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 AVENQ9NQS1 362 aaPredicted RBP19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 TOPORSQ9NS56 1045 aaPredicted RBP19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 PKD2L1Q9P0L9 805 aa19.27■□□□□ 0.68
PCDHB18P-201ENST00000524813 COL4A5P29400 1685 aa19.27■□□□□ 0.67
PCDHB18P-201ENST00000524813 IPO5O00410 1097 aaKnown RBP19.27■□□□□ 0.67
PCDHB18P-201ENST00000524813 FGFR1P11362 822 aa19.27■□□□□ 0.67
PCDHB18P-201ENST00000524813 MARK3P27448 753 aa19.27■□□□□ 0.67
PCDHB18P-201ENST00000524813 FASTKD3Q14CZ7 662 aaKnown RBP19.27■□□□□ 0.67
PCDHB18P-201ENST00000524813 SLC45A4Q5BKX6 768 aa19.27■□□□□ 0.67
PCDHB18P-201ENST00000524813 AP1ARQ63HQ0 302 aa19.27■□□□□ 0.67
PCDHB18P-201ENST00000524813 CCDC174Q6PII3 467 aa19.27■□□□□ 0.67
PCDHB18P-201ENST00000524813 ANKS1BQ7Z6G8 1248 aa19.27■□□□□ 0.67
PCDHB18P-201ENST00000524813 RBBP8NLQ8NC74 664 aaPredicted RBP19.27■□□□□ 0.67
PCDHB18P-201ENST00000524813 FAM81BQ96LP2 452 aa19.27■□□□□ 0.67
PCDHB18P-201ENST00000524813 TSC22D3Q99576 134 aa19.27■□□□□ 0.67
PCDHB18P-201ENST00000524813 SH2D3AQ9BRG2 576 aa19.27■□□□□ 0.67
PCDHB18P-201ENST00000524813 TLE6Q9H808 572 aa19.27■□□□□ 0.67
PCDHB18P-201ENST00000524813 DCLRE1BQ9H816 532 aa19.27■□□□□ 0.67
PCDHB18P-201ENST00000524813 NPHS2Q9NP85 383 aa19.27■□□□□ 0.67
PCDHB18P-201ENST00000524813 CYLDQ9NQC7 956 aa19.27■□□□□ 0.67
PCDHB18P-201ENST00000524813 A0A1W2PPM1 405 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 SLC16A4O15374 487 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 SMIM24O75264 130 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 PROSCO94903 275 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 GJC1P36383 396 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 RBM5P52756 815 aaKnown RBP eCLIP19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 TAS2R40P59535 323 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 JAG1P78504 1218 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 GTF2BQ00403 316 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 KLC1Q07866 573 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 PTP4A2Q12974 167 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 BIRC2Q13490 618 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 MUM1Q2TAK8 710 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 GNPTABQ3T906 1256 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 TMEM154Q6P9G4 183 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 RFWD3Q6PCD5 774 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 MTDHQ86UE4 582 aaKnown RBP19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 RTKN2Q8IZC4 609 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 CEP120Q8N960 986 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 VPS37BQ9H9H4 285 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 TMEM8AQ9HCN3 771 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 RAB20Q9NX57 234 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 FAM198AQ9UFP1 575 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 RPL26L1Q9UNX3 145 aaKnown RBP19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 COQ4Q9Y3A0 265 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 LMNAP02545 664 aaKnown RBP19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 VIL1P09327 827 aaKnown RBP19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 CD58P19256 250 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 LBRQ14739 615 aaKnown RBP19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 KHDC1Q4VXA5 237 aaKnown RBP19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 SPDYAQ5MJ70 313 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 GLIS1Q8NBF1 620 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 FBXL13Q8NEE6 735 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 ZNF75CPQ92670 426 aaPredicted RBP19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 TTC25Q96NG3 672 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 SENP1Q9P0U3 644 aa19.26■□□□□ 0.67
PCDHB18P-201ENST00000524813 PIM2Q9P1W9 311 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms