RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 ZNF516Q92618 1163 aa8.82□□□□□ -1
CHD7-202ENST00000524602 RBM41Q96IZ5 413 aaKnown RBP8.82□□□□□ -1
CHD7-202ENST00000524602 CFAP57Q96MR6 1250 aa8.82□□□□□ -1
CHD7-202ENST00000524602 PI4K2AQ9BTU6 479 aa8.82□□□□□ -1
CHD7-202ENST00000524602 PARVAQ9NVD7 372 aa8.82□□□□□ -1
CHD7-202ENST00000524602 DONSONQ9NYP3 566 aa8.82□□□□□ -1
CHD7-202ENST00000524602 NKIRAS1Q9NYS0 192 aa8.82□□□□□ -1
CHD7-202ENST00000524602 IP6K2Q9UHH9 426 aa8.82□□□□□ -1
CHD7-202ENST00000524602 VWA5AO00534 786 aa8.81□□□□□ -1
CHD7-202ENST00000524602 ZNF862O60290 1169 aa8.81□□□□□ -1
CHD7-202ENST00000524602 ATP6V1G2O95670 118 aa8.81□□□□□ -1
CHD7-202ENST00000524602 NR3C2P08235 984 aa8.81□□□□□ -1
CHD7-202ENST00000524602 BRAFP15056 766 aa8.81□□□□□ -1
CHD7-202ENST00000524602 KLRC2P26717 231 aa8.81□□□□□ -1
CHD7-202ENST00000524602 PTPN7P35236 360 aa8.81□□□□□ -1
CHD7-202ENST00000524602 COPS2P61201 443 aa8.81□□□□□ -1
CHD7-202ENST00000524602 MCL1Q07820 350 aa8.81□□□□□ -1
CHD7-202ENST00000524602 CCDC15Q0P6D6 951 aa8.81□□□□□ -1
CHD7-202ENST00000524602 MAMLD1Q13495 774 aa8.81□□□□□ -1
CHD7-202ENST00000524602 ACVR2BQ13705 512 aa8.81□□□□□ -1
CHD7-202ENST00000524602 KYNUQ16719 465 aa8.81□□□□□ -1
CHD7-202ENST00000524602 LRRC38Q5VT99 294 aa8.81□□□□□ -1
CHD7-202ENST00000524602 TAS1R3Q7RTX0 852 aa8.81□□□□□ -1
CHD7-202ENST00000524602 SPATA21Q7Z572 469 aa8.81□□□□□ -1
CHD7-202ENST00000524602 TDRPQ86YL5 185 aa8.81□□□□□ -1
CHD7-202ENST00000524602 RCOR2Q8IZ40 523 aa8.81□□□□□ -1
CHD7-202ENST00000524602 NSUN6Q8TEA1 469 aaKnown RBP8.81□□□□□ -1
CHD7-202ENST00000524602 JPH1Q9HDC5 661 aaPredicted RBP8.81□□□□□ -1
CHD7-202ENST00000524602 XPNPEP1Q9NQW7 623 aa8.81□□□□□ -1
CHD7-202ENST00000524602 ADAM22Q9P0K1 906 aa8.81□□□□□ -1
CHD7-202ENST00000524602 DOCK1Q14185 1865 aa8.81□□□□□ -1
CHD7-202ENST00000524602 ATP2C2O75185 946 aa8.81□□□□□ -1
CHD7-202ENST00000524602 TNNI1P19237 187 aa8.81□□□□□ -1
CHD7-202ENST00000524602 SKIV2L2P42285 1042 aaKnown RBP8.81□□□□□ -1
CHD7-202ENST00000524602 TBC1D10BQ4KMP7 808 aaPredicted RBP8.81□□□□□ -1
CHD7-202ENST00000524602 XKR3Q5GH77 459 aa8.81□□□□□ -1
CHD7-202ENST00000524602 TDRD10Q5VZ19 366 aaKnown RBP8.81□□□□□ -1
CHD7-202ENST00000524602 IZUMO3Q5VZ72 239 aa8.81□□□□□ -1
CHD7-202ENST00000524602 KIRREL3Q8IZU9 778 aa8.81□□□□□ -1
CHD7-202ENST00000524602 POLR3FQ9H1D9 316 aaPredicted RBP8.81□□□□□ -1
CHD7-202ENST00000524602 RXFP1Q9HBX9 757 aa8.81□□□□□ -1
CHD7-202ENST00000524602 KCNK9Q9NPC2 374 aa8.81□□□□□ -1
CHD7-202ENST00000524602 EURLQ9NYK6 297 aa8.81□□□□□ -1
CHD7-202ENST00000524602 PRKAG3Q9UGI9 489 aa8.81□□□□□ -1
CHD7-202ENST00000524602 AGO2Q9UKV8 859 aaKnown RBP8.81□□□□□ -1
CHD7-202ENST00000524602 NEBLO76041 1014 aa8.81□□□□□ -1
CHD7-202ENST00000524602 GNA15P30679 374 aa8.81□□□□□ -1
CHD7-202ENST00000524602 STX2P32856 288 aa8.81□□□□□ -1
CHD7-202ENST00000524602 AP3M2P53677 418 aa8.81□□□□□ -1
CHD7-202ENST00000524602 PRKCEQ02156 737 aa8.81□□□□□ -1
CHD7-202ENST00000524602 BNIP1Q12981 228 aa8.81□□□□□ -1
CHD7-202ENST00000524602 ZNF268Q14587 947 aaPredicted RBP8.81□□□□□ -1
CHD7-202ENST00000524602 R3HDM1Q15032 1099 aaKnown RBP8.81□□□□□ -1
CHD7-202ENST00000524602 NUGGCQ68CJ6 796 aa8.81□□□□□ -1
CHD7-202ENST00000524602 RNF43Q68DV7 783 aa8.81□□□□□ -1
CHD7-202ENST00000524602 MIS18BP1Q6P0N0 1132 aa8.81□□□□□ -1
CHD7-202ENST00000524602 FAM228AQ86W67 206 aa8.81□□□□□ -1
CHD7-202ENST00000524602 GIMAP7Q8NHV1 300 aa8.81□□□□□ -1
CHD7-202ENST00000524602 TRIM7Q9C029 511 aa8.81□□□□□ -1
CHD7-202ENST00000524602 RPAP3Q9H6T3 665 aaPredicted RBP8.81□□□□□ -1
CHD7-202ENST00000524602 RNF146Q9NTX7 359 aa8.81□□□□□ -1
CHD7-202ENST00000524602 FGFR1OP2Q9NVK5 253 aa8.81□□□□□ -1
CHD7-202ENST00000524602 SENP1Q9P0U3 644 aa8.81□□□□□ -1
CHD7-202ENST00000524602 SLC9A2Q9UBY0 812 aa8.81□□□□□ -1
CHD7-202ENST00000524602 SEPT9Q9UHD8 586 aaPredicted RBP8.81□□□□□ -1
CHD7-202ENST00000524602 MCM8Q9UJA3 840 aa8.81□□□□□ -1
CHD7-202ENST00000524602 R3HDM2Q9Y2K5 976 aaKnown RBP8.81□□□□□ -1
CHD7-202ENST00000524602 TJP3O95049 919 aa8.8□□□□□ -1
CHD7-202ENST00000524602 ZNF280AP59817 542 aaPredicted RBP8.8□□□□□ -1
CHD7-202ENST00000524602 IL9RQ01113 521 aa8.8□□□□□ -1
CHD7-202ENST00000524602 TAP1Q03518 808 aa8.8□□□□□ -1
CHD7-202ENST00000524602 BAATQ14032 418 aaPredicted RBP8.8□□□□□ -1
CHD7-202ENST00000524602 RASA2Q15283 850 aa8.8□□□□□ -1
CHD7-202ENST00000524602 SWSAP1Q6NVH7 229 aa8.8□□□□□ -1
CHD7-202ENST00000524602 FEZF2Q8TBJ5 459 aa8.8□□□□□ -1
CHD7-202ENST00000524602 TEPSINQ96N21 525 aa8.8□□□□□ -1
CHD7-202ENST00000524602 TGS1Q96RS0 853 aaKnown RBP8.8□□□□□ -1
CHD7-202ENST00000524602 CGRRF1Q99675 332 aa8.8□□□□□ -1
CHD7-202ENST00000524602 HERPUD2Q9BSE4 406 aa8.8□□□□□ -1
CHD7-202ENST00000524602 PHACTR1Q9C0D0 580 aa8.8□□□□□ -1
CHD7-202ENST00000524602 ABCF3Q9NUQ8 709 aa8.8□□□□□ -1
CHD7-202ENST00000524602 NAALADL1Q9UQQ1 740 aa8.8□□□□□ -1
CHD7-202ENST00000524602 DRG1Q9Y295 367 aaKnown RBP8.8□□□□□ -1
CHD7-202ENST00000524602 MYH9P35579 1960 aaKnown RBP8.8□□□□□ -1
CHD7-202ENST00000524602 PHIPQ8WWQ0 1821 aa8.8□□□□□ -1
CHD7-202ENST00000524602 LSM8O95777 96 aaKnown RBP8.8□□□□□ -1
CHD7-202ENST00000524602 CALB1P05937 261 aa8.8□□□□□ -1
CHD7-202ENST00000524602 CLTAP09496 248 aa8.8□□□□□ -1
CHD7-202ENST00000524602 NAMPTP43490 491 aa8.8□□□□□ -1
CHD7-202ENST00000524602 NFX1Q12986 1120 aaKnown RBP8.8□□□□□ -1
CHD7-202ENST00000524602 LRRC14Q15048 493 aa8.8□□□□□ -1
CHD7-202ENST00000524602 MTFR1Q15390 333 aa8.8□□□□□ -1
CHD7-202ENST00000524602 GNPTABQ3T906 1256 aa8.8□□□□□ -1
CHD7-202ENST00000524602 EAPPQ56P03 285 aaPredicted RBP8.8□□□□□ -1
CHD7-202ENST00000524602 ABHD15Q6UXT9 468 aa8.8□□□□□ -1
CHD7-202ENST00000524602 SAMD7Q7Z3H4 446 aa8.8□□□□□ -1
CHD7-202ENST00000524602 ANKS1BQ7Z6G8 1248 aa8.8□□□□□ -1
CHD7-202ENST00000524602 NOD2Q9HC29 1040 aa8.8□□□□□ -1
CHD7-202ENST00000524602 PCDHB4Q9Y5E5 795 aa8.8□□□□□ -1
CHD7-202ENST00000524602 LOC285556D6RIA3 1793 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms